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| Name: python-probeinterface-doc | Distribution: Fedora Project |
| Version: 0.2.21 | Vendor: Fedora Project |
| Release: 1.fc40 | Build date: Mon Feb 5 14:26:38 2024 |
| Group: Unspecified | Build host: buildvm-x86-09.iad2.fedoraproject.org |
| Size: 1257324 | Source RPM: python-probeinterface-0.2.21-1.fc40.src.rpm |
| Packager: Fedora Project | |
| Url: https://github.com/SpikeInterface/probeinterface | |
| Summary: Documentation for probeinterface | |
A Python package to handle the layout, geometry, and wiring of silicon probes
for extracellular electrophysiology experiments.
Goals
Make a lightweight package to handle:
• probe contact geometry (both 2D and 3D layouts)
• probe shape (contour of the probe, shape of channel contact, …)
• probe wiring to device (the physical layout often doesn’t match the channel
ordering)
• combining several probes into a device with global geometry + global wiring
• exporting probe geometry data into JSON files
• loading existing probe geometry files (Neuronexus, imec, Cambridge
Neurotech…) Started here
Bonus:
• optional plotting (based on matplotlib)
• load/save geometry using common formats (PRB, CSV, NWB, …)
• handle SI length units correctly um/mm/…
Target users/project:
• spikeinterface team: integrate this into spikeextractor for channel
location
• neo team: handle array_annotations for AnalogSignal
• spikeforest team: use this package for plotting probe activity
• phy team: integrate for probe display
• spyking-circus team: handle probe with this package
• kilosort team: handle probe with this package
• tridesclous team: handle probe with this package
• open ephys team: automatically generate channel map configuration files
MIT
* Mon Feb 05 2024 Benjamin A. Beasley <[email protected]> - 0.2.21-1 - Update to 0.2.21 (close RHBZ#2262778) * Fri Jan 26 2024 Fedora Release Engineering <[email protected]> - 0.2.20-4 - Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild * Mon Jan 22 2024 Fedora Release Engineering <[email protected]> - 0.2.20-3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild * Mon Dec 18 2023 Benjamin A. Beasley <[email protected]> - 0.2.20-2 - Assert that %pyproject_files contains a license file * Tue Dec 12 2023 Benjamin A. Beasley <[email protected]> - 0.2.20-1 - Update to 0.2.20 (close RHBZ#2254044) * Thu Nov 02 2023 Benjamin A. Beasley <[email protected]> - 0.2.19-1 - Update to 0.2.19 * Tue Oct 31 2023 Benjamin A. Beasley <[email protected]> - 0.2.18-1 - Update to 0.2.18 (close RHBZ#2247108) * Fri Jul 21 2023 Fedora Release Engineering <[email protected]> - 0.2.17-4 - Rebuilt for https://fedoraproject.org/wiki/Fedora_39_Mass_Rebuild * Wed Jul 12 2023 Benjamin A. Beasley <[email protected]> - 0.2.17-3 - Use trailing slashes for directories in files lists * Wed Jun 28 2023 Python Maint <[email protected]> - 0.2.17-2 - Rebuilt for Python 3.12 * Tue Jun 27 2023 Benjamin A. Beasley <[email protected]> - 0.2.17-1 - Update to 0.2.17 (close RHBZ#2217884) * Mon Jun 19 2023 Benjamin A. Beasley <[email protected]> - 0.2.16-3 - Use new (rpm 4.17.1+) bcond style * Sat Mar 18 2023 Benjamin A. Beasley <[email protected]> - 0.2.16-2 - Don’t assume %_smp_mflags is -j%_smp_build_ncpus * Thu Feb 09 2023 Benjamin A. Beasley <[email protected]> - 0.2.16-1 - Update to 0.2.16 (close RHBZ#2168525) * Fri Jan 20 2023 Fedora Release Engineering <[email protected]> - 0.2.15-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_38_Mass_Rebuild * Mon Dec 12 2022 Benjamin A. Beasley <[email protected]> - 0.2.15-1 - Update to 0.2.15 (close RHBZ#2152539) * Thu Oct 27 2022 Benjamin A. Beasley <[email protected]> - 0.2.14-1 - Update to 0.2.14 (close RHBZ#2138117) * Fri Oct 21 2022 Benjamin A. Beasley <[email protected]> - 0.2.13-1 - Update to 0.2.13 (close RHBZ#2136599) * Mon Oct 10 2022 Benjamin A. Beasley <[email protected]> - 0.2.12-1 - Update to 0.2.12 (close RHBZ#2133405) * Mon Oct 10 2022 Benjamin A. Beasley <[email protected]> - 0.2.11-2 - Confirm License is SPDX MIT * Wed Sep 14 2022 Benjamin A. Beasley <[email protected]> - 0.2.11-1 - Update to 0.2.11 (close RHBZ#2126799) * Thu Sep 01 2022 Benjamin A. Beasley <[email protected]> - 0.2.10-1 - Update to 0.2.10 (close RHBZ#2123300) * Fri Jul 22 2022 Fedora Release Engineering <[email protected]> - 0.2.9-3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_37_Mass_Rebuild * Wed Jun 15 2022 Python Maint <[email protected]> - 0.2.9-2 - Rebuilt for Python 3.11 * Fri Apr 15 2022 Benjamin A. Beasley <[email protected]> - 0.2.9-1 - Update to 0.2.9 (close RHBZ#2075767) * Wed Mar 23 2022 Benjamin A. Beasley <[email protected]> - 0.2.8-1 - Update to 0.2.8 (close RHBZ#2067101) * Tue Mar 01 2022 Benjamin A. Beasley <[email protected]> - 0.2.7-1 - Update to 0.2.7 (close RHBZ#2059621)
/usr/share/doc/python-probeinterface-doc /usr/share/doc/python-probeinterface-doc/examples /usr/share/doc/python-probeinterface-doc/examples/README.rst /usr/share/doc/python-probeinterface-doc/examples/ex_01_generate_probe_from_sratch.py /usr/share/doc/python-probeinterface-doc/examples/ex_02_probe_2d_probe_3d.py /usr/share/doc/python-probeinterface-doc/examples/ex_03_generate_probe_group.py /usr/share/doc/python-probeinterface-doc/examples/ex_04_multi_shank_probe.py /usr/share/doc/python-probeinterface-doc/examples/ex_05_device_channel_indices.py /usr/share/doc/python-probeinterface-doc/examples/ex_06_import_export_to_file.py /usr/share/doc/python-probeinterface-doc/examples/ex_07_probe_generator.py /usr/share/doc/python-probeinterface-doc/examples/ex_08_more_plotting_examples.py /usr/share/doc/python-probeinterface-doc/examples/ex_09_more_complicated_probe.py /usr/share/doc/python-probeinterface-doc/examples/ex_10_get_probe_from_library.py /usr/share/doc/python-probeinterface-doc/examples/ex_11_automatic_wiring.py /usr/share/doc/python-probeinterface-doc/examples/ex_12_plot_values.py /usr/share/doc/python-probeinterface-doc/examples/my_two_probe_setup.json /usr/share/doc/python-probeinterface-doc/examples/two_tetrodes.prb /usr/share/doc/python-probeinterface-doc/probeinterface.pdf /usr/share/licenses/python-probeinterface-doc /usr/share/licenses/python-probeinterface-doc/LICENSE
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