| Index | index by Group | index by Distribution | index by Vendor | index by creation date | index by Name | Mirrors | Help | Search |
| Name: R-Biostrings | Distribution: Fedora Project |
| Version: 2.64.1 | Vendor: Fedora Project |
| Release: 9.fc41 | Build date: Wed Jul 17 17:37:14 2024 |
| Group: Unspecified | Build host: buildvm-s390x-09.s390.fedoraproject.org |
| Size: 16027926 | Source RPM: R-Biostrings-2.64.1-9.fc41.src.rpm |
| Packager: Fedora Project | |
| Url: http://bioconductor.org/packages/release/bioc/html/Biostrings.html | |
| Summary: String objects representing biological sequences | |
Memory efficient string containers, string matching algorithms, and other utilities, for fast manipulation of large biological sequences or set of sequences.
Artistic-2.0
* Wed Jul 17 2024 Fedora Release Engineering <[email protected]> - 2.64.1-9 - Rebuilt for https://fedoraproject.org/wiki/Fedora_41_Mass_Rebuild * Thu Apr 25 2024 Iñaki Úcar <[email protected]> - 2.64.1-8 - R-maint-sig mass rebuild * Sat Apr 20 2024 Miroslav Suchý <[email protected]> - 2.64.1-7 - convert license to SPDX * Mon Jan 22 2024 Fedora Release Engineering <[email protected]> - 2.64.1-6 - Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild * Fri Jan 19 2024 Fedora Release Engineering <[email protected]> - 2.64.1-5 - Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild * Wed Jul 19 2023 Fedora Release Engineering <[email protected]> - 2.64.1-4 - Rebuilt for https://fedoraproject.org/wiki/Fedora_39_Mass_Rebuild * Fri Apr 21 2023 Iñaki Úcar <[email protected]> - 2.64.1-3 - R-maint-sig mass rebuild * Wed Jan 18 2023 Fedora Release Engineering <[email protected]> - 2.64.1-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_38_Mass_Rebuild * Sat Sep 03 2022 Tom Callaway <[email protected]> - 2.64.1-1 - update to 2.64.1 - rebuild for R 4.2.1 * Wed Jul 20 2022 Fedora Release Engineering <[email protected]> - 2.60.1-4 - Rebuilt for https://fedoraproject.org/wiki/Fedora_37_Mass_Rebuild
/usr/lib/.build-id /usr/lib/.build-id/bb /usr/lib/.build-id/bb/3fee33b8f4bbc60821b0d4812876a62f1ade2e /usr/lib64/R/library/Biostrings /usr/lib64/R/library/Biostrings/DESCRIPTION /usr/lib64/R/library/Biostrings/INDEX /usr/lib64/R/library/Biostrings/Meta /usr/lib64/R/library/Biostrings/Meta/Rd.rds /usr/lib64/R/library/Biostrings/Meta/data.rds /usr/lib64/R/library/Biostrings/Meta/features.rds /usr/lib64/R/library/Biostrings/Meta/hsearch.rds /usr/lib64/R/library/Biostrings/Meta/links.rds /usr/lib64/R/library/Biostrings/Meta/nsInfo.rds /usr/lib64/R/library/Biostrings/Meta/package.rds /usr/lib64/R/library/Biostrings/Meta/vignette.rds /usr/lib64/R/library/Biostrings/NAMESPACE /usr/lib64/R/library/Biostrings/NEWS /usr/lib64/R/library/Biostrings/R /usr/lib64/R/library/Biostrings/R/Biostrings /usr/lib64/R/library/Biostrings/R/Biostrings.rdb /usr/lib64/R/library/Biostrings/R/Biostrings.rdx /usr/lib64/R/library/Biostrings/data /usr/lib64/R/library/Biostrings/data/BLOSUM100.rda /usr/lib64/R/library/Biostrings/data/BLOSUM45.rda /usr/lib64/R/library/Biostrings/data/BLOSUM50.rda /usr/lib64/R/library/Biostrings/data/BLOSUM62.rda /usr/lib64/R/library/Biostrings/data/BLOSUM80.rda /usr/lib64/R/library/Biostrings/data/HNF4alpha.rda /usr/lib64/R/library/Biostrings/data/PAM120.rda /usr/lib64/R/library/Biostrings/data/PAM250.rda /usr/lib64/R/library/Biostrings/data/PAM30.rda /usr/lib64/R/library/Biostrings/data/PAM40.rda /usr/lib64/R/library/Biostrings/data/PAM70.rda /usr/lib64/R/library/Biostrings/data/phiX174Phage.rda /usr/lib64/R/library/Biostrings/data/srPhiX174.rda /usr/lib64/R/library/Biostrings/data/yeastSEQCHR1.rda /usr/lib64/R/library/Biostrings/doc /usr/lib64/R/library/Biostrings/doc/Biostrings2Classes.R /usr/lib64/R/library/Biostrings/doc/Biostrings2Classes.Rnw /usr/lib64/R/library/Biostrings/doc/Biostrings2Classes.pdf /usr/lib64/R/library/Biostrings/doc/BiostringsQuickOverview.Rnw /usr/lib64/R/library/Biostrings/doc/BiostringsQuickOverview.pdf /usr/lib64/R/library/Biostrings/doc/MultipleAlignments.R /usr/lib64/R/library/Biostrings/doc/MultipleAlignments.Rnw /usr/lib64/R/library/Biostrings/doc/MultipleAlignments.pdf /usr/lib64/R/library/Biostrings/doc/PairwiseAlignments.R /usr/lib64/R/library/Biostrings/doc/PairwiseAlignments.Rnw /usr/lib64/R/library/Biostrings/doc/PairwiseAlignments.pdf /usr/lib64/R/library/Biostrings/doc/index.html /usr/lib64/R/library/Biostrings/doc/matchprobes.R /usr/lib64/R/library/Biostrings/doc/matchprobes.Rnw /usr/lib64/R/library/Biostrings/doc/matchprobes.pdf /usr/lib64/R/library/Biostrings/extdata /usr/lib64/R/library/Biostrings/extdata/Phylip.txt /usr/lib64/R/library/Biostrings/extdata/README /usr/lib64/R/library/Biostrings/extdata/Sc.fa /usr/lib64/R/library/Biostrings/extdata/Sp.fa /usr/lib64/R/library/Biostrings/extdata/dm3_upstream2000.fa.gz /usr/lib64/R/library/Biostrings/extdata/fastaEx.fa /usr/lib64/R/library/Biostrings/extdata/hg18chr8_gap.txt /usr/lib64/R/library/Biostrings/extdata/hg18chrY_gap.txt /usr/lib64/R/library/Biostrings/extdata/msx2_mRNA.aln /usr/lib64/R/library/Biostrings/extdata/s_1_sequence.txt /usr/lib64/R/library/Biostrings/extdata/someORF.fa /usr/lib64/R/library/Biostrings/extdata/someORF.fa.gz /usr/lib64/R/library/Biostrings/help /usr/lib64/R/library/Biostrings/help/+21+3D+2CBString+2Ccharacter-method.html /usr/lib64/R/library/Biostrings/help/+21+3D+2CXString+2CXString-method.html /usr/lib64/R/library/Biostrings/help/+21+3D+2CXString+2CXStringViews-method.html /usr/lib64/R/library/Biostrings/help/+21+3D+2CXStringViews+2CXString-method.html /usr/lib64/R/library/Biostrings/help/+21+3D+2CXStringViews+2CXStringViews-method.html /usr/lib64/R/library/Biostrings/help/+21+3D+2CXStringViews+2Ccharacter-method.html /usr/lib64/R/library/Biostrings/help/+21+3D+2Ccharacter+2CBString-method.html /usr/lib64/R/library/Biostrings/help/+21+3D+2Ccharacter+2CXStringViews-method.html /usr/lib64/R/library/Biostrings/help/+3D+3D+2CBString+2Ccharacter-method.html /usr/lib64/R/library/Biostrings/help/+3D+3D+2CXString+2CXString-method.html /usr/lib64/R/library/Biostrings/help/+3D+3D+2CXString+2CXStringViews-method.html /usr/lib64/R/library/Biostrings/help/+3D+3D+2CXStringViews+2CXString-method.html /usr/lib64/R/library/Biostrings/help/+3D+3D+2CXStringViews+2CXStringViews-method.html /usr/lib64/R/library/Biostrings/help/+3D+3D+2CXStringViews+2Ccharacter-method.html /usr/lib64/R/library/Biostrings/help/+3D+3D+2Ccharacter+2CBString-method.html /usr/lib64/R/library/Biostrings/help/+3D+3D+2Ccharacter+2CXStringViews-method.html /usr/lib64/R/library/Biostrings/help/+5B+2CXStringPartialMatches-method.html /usr/lib64/R/library/Biostrings/help/+5B+5B+2CByPos_MIndex-method.html /usr/lib64/R/library/Biostrings/help/+5B+5B+2CPDict-method.html /usr/lib64/R/library/Biostrings/help/+5B+5B+2CSparseList-method.html /usr/lib64/R/library/Biostrings/help/.inplaceReplaceLetterAt.html /usr/lib64/R/library/Biostrings/help/AAMultipleAlignment-class.html /usr/lib64/R/library/Biostrings/help/AAMultipleAlignment.html /usr/lib64/R/library/Biostrings/help/AAString-class.html /usr/lib64/R/library/Biostrings/help/AAString.html /usr/lib64/R/library/Biostrings/help/AAStringSet-class.html /usr/lib64/R/library/Biostrings/help/AAStringSet.html /usr/lib64/R/library/Biostrings/help/AAStringSetList-class.html /usr/lib64/R/library/Biostrings/help/AAStringSetList.html /usr/lib64/R/library/Biostrings/help/AA_ALPHABET.html /usr/lib64/R/library/Biostrings/help/AA_PROTEINOGENIC.html /usr/lib64/R/library/Biostrings/help/AA_STANDARD.html /usr/lib64/R/library/Biostrings/help/ACtree2-class.html /usr/lib64/R/library/Biostrings/help/ACtree2.html /usr/lib64/R/library/Biostrings/help/AMINO_ACID_CODE.html /usr/lib64/R/library/Biostrings/help/AlignedXStringSet-class.html /usr/lib64/R/library/Biostrings/help/AlignedXStringSet.html /usr/lib64/R/library/Biostrings/help/AlignedXStringSet0-class.html /usr/lib64/R/library/Biostrings/help/AlignedXStringSet0.html /usr/lib64/R/library/Biostrings/help/AnIndex /usr/lib64/R/library/Biostrings/help/BLOSUM100.html /usr/lib64/R/library/Biostrings/help/BLOSUM45.html /usr/lib64/R/library/Biostrings/help/BLOSUM50.html /usr/lib64/R/library/Biostrings/help/BLOSUM62.html /usr/lib64/R/library/Biostrings/help/BLOSUM80.html /usr/lib64/R/library/Biostrings/help/BString-class.html /usr/lib64/R/library/Biostrings/help/BString.html /usr/lib64/R/library/Biostrings/help/BStringSet-class.html /usr/lib64/R/library/Biostrings/help/BStringSet.html /usr/lib64/R/library/Biostrings/help/BStringSetList-class.html /usr/lib64/R/library/Biostrings/help/BStringSetList.html /usr/lib64/R/library/Biostrings/help/Biostrings-internals.html /usr/lib64/R/library/Biostrings/help/Biostrings.rdb /usr/lib64/R/library/Biostrings/help/Biostrings.rdx /usr/lib64/R/library/Biostrings/help/ByPos_MIndex-class.html /usr/lib64/R/library/Biostrings/help/DNAMultipleAlignment-class.html /usr/lib64/R/library/Biostrings/help/DNAMultipleAlignment.html /usr/lib64/R/library/Biostrings/help/DNAString-class.html /usr/lib64/R/library/Biostrings/help/DNAString.html /usr/lib64/R/library/Biostrings/help/DNAStringSet-class.html /usr/lib64/R/library/Biostrings/help/DNAStringSet.html /usr/lib64/R/library/Biostrings/help/DNAStringSetList-class.html /usr/lib64/R/library/Biostrings/help/DNAStringSetList.html /usr/lib64/R/library/Biostrings/help/DNA_ALPHABET.html /usr/lib64/R/library/Biostrings/help/DNA_BASES.html /usr/lib64/R/library/Biostrings/help/Expanded_TB_PDict-class.html /usr/lib64/R/library/Biostrings/help/Expanded_TB_PDict.html /usr/lib64/R/library/Biostrings/help/GENETIC_CODE.html /usr/lib64/R/library/Biostrings/help/GENETIC_CODE_TABLE.html /usr/lib64/R/library/Biostrings/help/HNF4alpha.html /usr/lib64/R/library/Biostrings/help/IUPAC_CODE_MAP.html /usr/lib64/R/library/Biostrings/help/IlluminaQuality-class.html /usr/lib64/R/library/Biostrings/help/IlluminaQuality.html /usr/lib64/R/library/Biostrings/help/InDel-class.html /usr/lib64/R/library/Biostrings/help/InDel.html /usr/lib64/R/library/Biostrings/help/MIndex-class.html /usr/lib64/R/library/Biostrings/help/MIndex.html /usr/lib64/R/library/Biostrings/help/MTB_PDict-class.html /usr/lib64/R/library/Biostrings/help/MTB_PDict.html /usr/lib64/R/library/Biostrings/help/MaskedAAString-class.html /usr/lib64/R/library/Biostrings/help/MaskedAAString.html /usr/lib64/R/library/Biostrings/help/MaskedBString-class.html /usr/lib64/R/library/Biostrings/help/MaskedBString.html /usr/lib64/R/library/Biostrings/help/MaskedDNAString-class.html /usr/lib64/R/library/Biostrings/help/MaskedDNAString.html /usr/lib64/R/library/Biostrings/help/MaskedRNAString-class.html /usr/lib64/R/library/Biostrings/help/MaskedRNAString.html /usr/lib64/R/library/Biostrings/help/MaskedXString-class.html /usr/lib64/R/library/Biostrings/help/MaskedXString.html /usr/lib64/R/library/Biostrings/help/MultipleAlignment-class.html /usr/lib64/R/library/Biostrings/help/MultipleAlignment.html /usr/lib64/R/library/Biostrings/help/N50.html /usr/lib64/R/library/Biostrings/help/PAM120.html /usr/lib64/R/library/Biostrings/help/PAM250.html /usr/lib64/R/library/Biostrings/help/PAM30.html /usr/lib64/R/library/Biostrings/help/PAM40.html /usr/lib64/R/library/Biostrings/help/PAM70.html /usr/lib64/R/library/Biostrings/help/PDict+2CAsIs-method.html /usr/lib64/R/library/Biostrings/help/PDict+2CDNAStringSet-method.html /usr/lib64/R/library/Biostrings/help/PDict+2CXStringViews-method.html /usr/lib64/R/library/Biostrings/help/PDict+2Ccharacter-method.html /usr/lib64/R/library/Biostrings/help/PDict+2Cprobetable-method.html /usr/lib64/R/library/Biostrings/help/PDict-class.html /usr/lib64/R/library/Biostrings/help/PDict.html /usr/lib64/R/library/Biostrings/help/PDict3Parts-class.html /usr/lib64/R/library/Biostrings/help/PDict3Parts.html /usr/lib64/R/library/Biostrings/help/PWM+2CDNAStringSet-method.html /usr/lib64/R/library/Biostrings/help/PWM+2Ccharacter-method.html /usr/lib64/R/library/Biostrings/help/PWM+2Cmatrix-method.html /usr/lib64/R/library/Biostrings/help/PWM.html /usr/lib64/R/library/Biostrings/help/PWMscoreStartingAt.html /usr/lib64/R/library/Biostrings/help/PairwiseAlignments+2CXString+2CXString-method.html /usr/lib64/R/library/Biostrings/help/PairwiseAlignments+2CXStringSet+2Cmissing-method.html /usr/lib64/R/library/Biostrings/help/PairwiseAlignments+2Ccharacter+2Ccharacter-method.html /usr/lib64/R/library/Biostrings/help/PairwiseAlignments+2Ccharacter+2Cmissing-method.html /usr/lib64/R/library/Biostrings/help/PairwiseAlignments-class.html /usr/lib64/R/library/Biostrings/help/PairwiseAlignments-io.html /usr/lib64/R/library/Biostrings/help/PairwiseAlignments.html /usr/lib64/R/library/Biostrings/help/PairwiseAlignmentsSingleSubject+2CXString+2CXString-method.html /usr/lib64/R/library/Biostrings/help/PairwiseAlignmentsSingleSubject+2CXStringSet+2Cmissing-method.html /usr/lib64/R/library/Biostrings/help/PairwiseAlignmentsSingleSubject+2Ccharacter+2Ccharacter-method.html /usr/lib64/R/library/Biostrings/help/PairwiseAlignmentsSingleSubject+2Ccharacter+2Cmissing-method.html /usr/lib64/R/library/Biostrings/help/PairwiseAlignmentsSingleSubject-class.html /usr/lib64/R/library/Biostrings/help/PairwiseAlignmentsSingleSubject.html /usr/lib64/R/library/Biostrings/help/PairwiseAlignmentsSingleSubjectSummary-class.html /usr/lib64/R/library/Biostrings/help/PairwiseAlignmentsSingleSubjectSummary.html /usr/lib64/R/library/Biostrings/help/PhredQuality-class.html /usr/lib64/R/library/Biostrings/help/PhredQuality.html /usr/lib64/R/library/Biostrings/help/PreprocessedTB-class.html /usr/lib64/R/library/Biostrings/help/PreprocessedTB.html /usr/lib64/R/library/Biostrings/help/QualityAlignedXStringSet-class.html /usr/lib64/R/library/Biostrings/help/QualityAlignedXStringSet.html /usr/lib64/R/library/Biostrings/help/QualityScaledAAStringSet-class.html /usr/lib64/R/library/Biostrings/help/QualityScaledAAStringSet.html /usr/lib64/R/library/Biostrings/help/QualityScaledBStringSet-class.html /usr/lib64/R/library/Biostrings/help/QualityScaledBStringSet.html /usr/lib64/R/library/Biostrings/help/QualityScaledDNAStringSet-class.html /usr/lib64/R/library/Biostrings/help/QualityScaledDNAStringSet.html /usr/lib64/R/library/Biostrings/help/QualityScaledRNAStringSet-class.html /usr/lib64/R/library/Biostrings/help/QualityScaledRNAStringSet.html /usr/lib64/R/library/Biostrings/help/QualityScaledXStringSet-class.html /usr/lib64/R/library/Biostrings/help/QualityScaledXStringSet.html /usr/lib64/R/library/Biostrings/help/RNAMultipleAlignment-class.html /usr/lib64/R/library/Biostrings/help/RNAMultipleAlignment.html /usr/lib64/R/library/Biostrings/help/RNAString-class.html /usr/lib64/R/library/Biostrings/help/RNAString.html /usr/lib64/R/library/Biostrings/help/RNAStringSet-class.html /usr/lib64/R/library/Biostrings/help/RNAStringSet.html /usr/lib64/R/library/Biostrings/help/RNAStringSetList-class.html /usr/lib64/R/library/Biostrings/help/RNAStringSetList.html /usr/lib64/R/library/Biostrings/help/RNA_ALPHABET.html /usr/lib64/R/library/Biostrings/help/RNA_BASES.html /usr/lib64/R/library/Biostrings/help/RNA_GENETIC_CODE.html /usr/lib64/R/library/Biostrings/help/SolexaQuality-class.html /usr/lib64/R/library/Biostrings/help/SolexaQuality.html /usr/lib64/R/library/Biostrings/help/SparseList-class.html /usr/lib64/R/library/Biostrings/help/SparseList.html /usr/lib64/R/library/Biostrings/help/TB_PDict-class.html /usr/lib64/R/library/Biostrings/help/TB_PDict.html /usr/lib64/R/library/Biostrings/help/Twobit-class.html /usr/lib64/R/library/Biostrings/help/Twobit.html /usr/lib64/R/library/Biostrings/help/Views+2CMaskedXString-method.html /usr/lib64/R/library/Biostrings/help/Views+2CPairwiseAlignmentsSingleSubject-method.html /usr/lib64/R/library/Biostrings/help/Views+2CXString-method.html /usr/lib64/R/library/Biostrings/help/Views+2Ccharacter-method.html /usr/lib64/R/library/Biostrings/help/XString-class.html /usr/lib64/R/library/Biostrings/help/XString.html /usr/lib64/R/library/Biostrings/help/XStringCodec-class.html /usr/lib64/R/library/Biostrings/help/XStringCodec.html /usr/lib64/R/library/Biostrings/help/XStringPartialMatches-class.html /usr/lib64/R/library/Biostrings/help/XStringQuality-class.html /usr/lib64/R/library/Biostrings/help/XStringQuality.html /usr/lib64/R/library/Biostrings/help/XStringSet-class.html /usr/lib64/R/library/Biostrings/help/XStringSet-comparison.html /usr/lib64/R/library/Biostrings/help/XStringSet-io.html /usr/lib64/R/library/Biostrings/help/XStringSet.html /usr/lib64/R/library/Biostrings/help/XStringSetList-class.html /usr/lib64/R/library/Biostrings/help/XStringSetList.html /usr/lib64/R/library/Biostrings/help/XStringViews-class.html /usr/lib64/R/library/Biostrings/help/XStringViews.html /usr/lib64/R/library/Biostrings/help/aliases.rds /usr/lib64/R/library/Biostrings/help/align-utils.html /usr/lib64/R/library/Biostrings/help/aligned+2CAlignedXStringSet0-method.html /usr/lib64/R/library/Biostrings/help/aligned+2CPairwiseAlignmentsSingleSubject-method.html /usr/lib64/R/library/Biostrings/help/aligned.html /usr/lib64/R/library/Biostrings/help/alignedPattern+2CPairwiseAlignments-method.html /usr/lib64/R/library/Biostrings/help/alignedPattern.html /usr/lib64/R/library/Biostrings/help/alignedSubject+2CPairwiseAlignments-method.html /usr/lib64/R/library/Biostrings/help/alignedSubject.html /usr/lib64/R/library/Biostrings/help/alphabet+2CANY-method.html /usr/lib64/R/library/Biostrings/help/alphabet+2CXStringQuality-method.html /usr/lib64/R/library/Biostrings/help/alphabet.html /usr/lib64/R/library/Biostrings/help/alphabetFrequency+2CAAString-method.html /usr/lib64/R/library/Biostrings/help/alphabetFrequency+2CAAStringSet-method.html /usr/lib64/R/library/Biostrings/help/alphabetFrequency+2CDNAString-method.html /usr/lib64/R/library/Biostrings/help/alphabetFrequency+2CDNAStringSet-method.html /usr/lib64/R/library/Biostrings/help/alphabetFrequency+2CMaskedXString-method.html /usr/lib64/R/library/Biostrings/help/alphabetFrequency+2CMultipleAlignment-method.html /usr/lib64/R/library/Biostrings/help/alphabetFrequency+2CRNAString-method.html /usr/lib64/R/library/Biostrings/help/alphabetFrequency+2CRNAStringSet-method.html /usr/lib64/R/library/Biostrings/help/alphabetFrequency+2CXString-method.html /usr/lib64/R/library/Biostrings/help/alphabetFrequency+2CXStringSet-method.html /usr/lib64/R/library/Biostrings/help/alphabetFrequency+2CXStringViews-method.html /usr/lib64/R/library/Biostrings/help/alphabetFrequency.html /usr/lib64/R/library/Biostrings/help/anyNA+2CXStringSet-method.html /usr/lib64/R/library/Biostrings/help/as.character+2CAlignedXStringSet0-method.html /usr/lib64/R/library/Biostrings/help/as.character+2CMaskedXString-method.html /usr/lib64/R/library/Biostrings/help/as.character+2CMultipleAlignment-method.html /usr/lib64/R/library/Biostrings/help/as.character+2CPairwiseAlignmentsSingleSubject-method.html /usr/lib64/R/library/Biostrings/help/as.character+2CXString-method.html /usr/lib64/R/library/Biostrings/help/as.character+2CXStringSet-method.html /usr/lib64/R/library/Biostrings/help/as.character+2CXStringViews-method.html /usr/lib64/R/library/Biostrings/help/as.data.frame+2CXStringSet-method.html /usr/lib64/R/library/Biostrings/help/as.data.frame+2CXStringViews-method.html /usr/lib64/R/library/Biostrings/help/as.factor+2CXStringSet-method.html /usr/lib64/R/library/Biostrings/help/as.list+2CMTB_PDict-method.html /usr/lib64/R/library/Biostrings/help/as.list+2CSparseList-method.html /usr/lib64/R/library/Biostrings/help/as.matrix+2CMultipleAlignment-method.html /usr/lib64/R/library/Biostrings/help/as.matrix+2CPairwiseAlignmentsSingleSubject-method.html /usr/lib64/R/library/Biostrings/help/as.matrix+2CXStringQuality-method.html /usr/lib64/R/library/Biostrings/help/as.matrix+2CXStringSet-method.html /usr/lib64/R/library/Biostrings/help/as.matrix+2CXStringViews-method.html /usr/lib64/R/library/Biostrings/help/as.vector+2CXString-method.html /usr/lib64/R/library/Biostrings/help/as.vector+2CXStringQuality-method.html /usr/lib64/R/library/Biostrings/help/as.vector+2CXStringSet-method.html /usr/lib64/R/library/Biostrings/help/chartr+2CANY+2CANY+2CMaskedXString-method.html /usr/lib64/R/library/Biostrings/help/chartr+2CANY+2CANY+2CXString-method.html /usr/lib64/R/library/Biostrings/help/chartr+2CANY+2CANY+2CXStringSet-method.html /usr/lib64/R/library/Biostrings/help/chartr+2CANY+2CANY+2CXStringViews-method.html /usr/lib64/R/library/Biostrings/help/chartr.html /usr/lib64/R/library/Biostrings/help/class+3AAAMultipleAlignment.html /usr/lib64/R/library/Biostrings/help/class+3AAAString.html /usr/lib64/R/library/Biostrings/help/class+3AAAStringSet.html /usr/lib64/R/library/Biostrings/help/class+3AAAStringSetList.html /usr/lib64/R/library/Biostrings/help/class+3AACtree2.html /usr/lib64/R/library/Biostrings/help/class+3AAlignedXStringSet.html /usr/lib64/R/library/Biostrings/help/class+3AAlignedXStringSet0.html /usr/lib64/R/library/Biostrings/help/class+3ABString.html /usr/lib64/R/library/Biostrings/help/class+3ABStringSet.html /usr/lib64/R/library/Biostrings/help/class+3ABStringSetList.html /usr/lib64/R/library/Biostrings/help/class+3AByPos_MIndex.html /usr/lib64/R/library/Biostrings/help/class+3ADNAMultipleAlignment.html /usr/lib64/R/library/Biostrings/help/class+3ADNAString.html /usr/lib64/R/library/Biostrings/help/class+3ADNAStringSet.html /usr/lib64/R/library/Biostrings/help/class+3ADNAStringSetList.html /usr/lib64/R/library/Biostrings/help/class+3AExpanded_TB_PDict.html /usr/lib64/R/library/Biostrings/help/class+3AIlluminaQuality.html /usr/lib64/R/library/Biostrings/help/class+3AInDel.html /usr/lib64/R/library/Biostrings/help/class+3AMIndex.html /usr/lib64/R/library/Biostrings/help/class+3AMTB_PDict.html /usr/lib64/R/library/Biostrings/help/class+3AMaskedAAString.html /usr/lib64/R/library/Biostrings/help/class+3AMaskedBString.html /usr/lib64/R/library/Biostrings/help/class+3AMaskedDNAString.html /usr/lib64/R/library/Biostrings/help/class+3AMaskedRNAString.html /usr/lib64/R/library/Biostrings/help/class+3AMaskedXString.html /usr/lib64/R/library/Biostrings/help/class+3AMultipleAlignment.html /usr/lib64/R/library/Biostrings/help/class+3APDict.html /usr/lib64/R/library/Biostrings/help/class+3APDict3Parts.html /usr/lib64/R/library/Biostrings/help/class+3APairwiseAlignments.html /usr/lib64/R/library/Biostrings/help/class+3APairwiseAlignmentsSingleSubject.html /usr/lib64/R/library/Biostrings/help/class+3APairwiseAlignmentsSingleSubjectSummary.html /usr/lib64/R/library/Biostrings/help/class+3APhredQuality.html /usr/lib64/R/library/Biostrings/help/class+3APreprocessedTB.html /usr/lib64/R/library/Biostrings/help/class+3AQualityAlignedXStringSet.html /usr/lib64/R/library/Biostrings/help/class+3AQualityScaledAAStringSet.html /usr/lib64/R/library/Biostrings/help/class+3AQualityScaledBStringSet.html /usr/lib64/R/library/Biostrings/help/class+3AQualityScaledDNAStringSet.html /usr/lib64/R/library/Biostrings/help/class+3AQualityScaledRNAStringSet.html /usr/lib64/R/library/Biostrings/help/class+3AQualityScaledXStringSet.html /usr/lib64/R/library/Biostrings/help/class+3ARNAMultipleAlignment.html /usr/lib64/R/library/Biostrings/help/class+3ARNAString.html /usr/lib64/R/library/Biostrings/help/class+3ARNAStringSet.html /usr/lib64/R/library/Biostrings/help/class+3ARNAStringSetList.html /usr/lib64/R/library/Biostrings/help/class+3ASolexaQuality.html /usr/lib64/R/library/Biostrings/help/class+3ASparseList.html /usr/lib64/R/library/Biostrings/help/class+3ATB_PDict.html /usr/lib64/R/library/Biostrings/help/class+3ATwobit.html /usr/lib64/R/library/Biostrings/help/class+3AXString.html /usr/lib64/R/library/Biostrings/help/class+3AXStringCodec.html /usr/lib64/R/library/Biostrings/help/class+3AXStringPartialMatches.html /usr/lib64/R/library/Biostrings/help/class+3AXStringQuality.html /usr/lib64/R/library/Biostrings/help/class+3AXStringSet.html /usr/lib64/R/library/Biostrings/help/class+3AXStringSetList.html /usr/lib64/R/library/Biostrings/help/class+3AXStringViews.html /usr/lib64/R/library/Biostrings/help/codons+2CDNAString-method.html /usr/lib64/R/library/Biostrings/help/codons+2CMaskedDNAString-method.html /usr/lib64/R/library/Biostrings/help/codons+2CMaskedRNAString-method.html /usr/lib64/R/library/Biostrings/help/codons+2CRNAString-method.html /usr/lib64/R/library/Biostrings/help/codons.html /usr/lib64/R/library/Biostrings/help/coerce+2CAAString+2CMaskedAAString-method.html /usr/lib64/R/library/Biostrings/help/coerce+2CANY+2CAAStringSet-method.html /usr/lib64/R/library/Biostrings/help/coerce+2CANY+2CBStringSet-method.html /usr/lib64/R/library/Biostrings/help/coerce+2CANY+2CDNAStringSet-method.html /usr/lib64/R/library/Biostrings/help/coerce+2CANY+2CRNAStringSet-method.html /usr/lib64/R/library/Biostrings/help/coerce+2CANY+2CXStringSet-method.html /usr/lib64/R/library/Biostrings/help/coerce+2CBString+2CIlluminaQuality-method.html /usr/lib64/R/library/Biostrings/help/coerce+2CBString+2CMaskedBString-method.html /usr/lib64/R/library/Biostrings/help/coerce+2CBString+2CPhredQuality-method.html /usr/lib64/R/library/Biostrings/help/coerce+2CBString+2CSolexaQuality-method.html /usr/lib64/R/library/Biostrings/help/coerce+2CBStringSet+2CIlluminaQuality-method.html /usr/lib64/R/library/Biostrings/help/coerce+2CBStringSet+2CPhredQuality-method.html /usr/lib64/R/library/Biostrings/help/coerce+2CBStringSet+2CSolexaQuality-method.html /usr/lib64/R/library/Biostrings/help/coerce+2CDNAString+2CMaskedDNAString-method.html /usr/lib64/R/library/Biostrings/help/coerce+2CIntegerList+2CIlluminaQuality-method.html /usr/lib64/R/library/Biostrings/help/coerce+2CIntegerList+2CPhredQuality-method.html /usr/lib64/R/library/Biostrings/help/coerce+2CIntegerList+2CSolexaQuality-method.html /usr/lib64/R/library/Biostrings/help/coerce+2CList+2CAAStringSetList-method.html /usr/lib64/R/library/Biostrings/help/coerce+2CList+2CBStringSetList-method.html /usr/lib64/R/library/Biostrings/help/coerce+2CList+2CDNAStringSetList-method.html /usr/lib64/R/library/Biostrings/help/coerce+2CList+2CRNAStringSetList-method.html /usr/lib64/R/library/Biostrings/help/coerce+2CList+2CXStringSetList-method.html /usr/lib64/R/library/Biostrings/help/coerce+2CMIndex+2CCompressedIRangesList-method.html /usr/lib64/R/library/Biostrings/help/coerce+2CMaskedAAString+2CAAString-method.html /usr/lib64/R/library/Biostrings/help/coerce+2CMaskedBString+2CBString-method.html /usr/lib64/R/library/Biostrings/help/coerce+2CMaskedDNAString+2CDNAString-method.html /usr/lib64/R/library/Biostrings/help/coerce+2CMaskedRNAString+2CRNAString-method.html /usr/lib64/R/library/Biostrings/help/coerce+2CMaskedXString+2CMaskCollection-method.html /usr/lib64/R/library/Biostrings/help/coerce+2CMaskedXString+2CMaskedAAString-method.html /usr/lib64/R/library/Biostrings/help/coerce+2CMaskedXString+2CMaskedBString-method.html /usr/lib64/R/library/Biostrings/help/coerce+2CMaskedXString+2CMaskedDNAString-method.html /usr/lib64/R/library/Biostrings/help/coerce+2CMaskedXString+2CMaskedRNAString-method.html /usr/lib64/R/library/Biostrings/help/coerce+2CMaskedXString+2CNormalIRanges-method.html /usr/lib64/R/library/Biostrings/help/coerce+2CMaskedXString+2CViews-method.html /usr/lib64/R/library/Biostrings/help/coerce+2CMaskedXString+2CXStringViews-method.html /usr/lib64/R/library/Biostrings/help/coerce+2CMultipleAlignment+2CAAStringSet-method.html /usr/lib64/R/library/Biostrings/help/coerce+2CMultipleAlignment+2CBStringSet-method.html /usr/lib64/R/library/Biostrings/help/coerce+2CMultipleAlignment+2CDNAStringSet-method.html /usr/lib64/R/library/Biostrings/help/coerce+2CMultipleAlignment+2CRNAStringSet-method.html /usr/lib64/R/library/Biostrings/help/coerce+2CNumericList+2CIlluminaQuality-method.html /usr/lib64/R/library/Biostrings/help/coerce+2CNumericList+2CPhredQuality-method.html /usr/lib64/R/library/Biostrings/help/coerce+2CNumericList+2CSolexaQuality-method.html /usr/lib64/R/library/Biostrings/help/coerce+2CRNAString+2CMaskedRNAString-method.html /usr/lib64/R/library/Biostrings/help/coerce+2CXString+2CAAString-method.html /usr/lib64/R/library/Biostrings/help/coerce+2CXString+2CBString-method.html /usr/lib64/R/library/Biostrings/help/coerce+2CXString+2CDNAString-method.html /usr/lib64/R/library/Biostrings/help/coerce+2CXString+2CRNAString-method.html /usr/lib64/R/library/Biostrings/help/coerce+2CXStringQuality+2CCompressedIntegerList-method.html /usr/lib64/R/library/Biostrings/help/coerce+2CXStringQuality+2CCompressedNumericList-method.html /usr/lib64/R/library/Biostrings/help/coerce+2CXStringQuality+2CIntegerList-method.html /usr/lib64/R/library/Biostrings/help/coerce+2CXStringQuality+2CNumericList-method.html /usr/lib64/R/library/Biostrings/help/coerce+2CXStringQuality+2Cmatrix-method.html /usr/lib64/R/library/Biostrings/help/coerce+2CXStringSet+2CViews-method.html /usr/lib64/R/library/Biostrings/help/coerce+2CXStringSet+2CXStringViews-method.html /usr/lib64/R/library/Biostrings/help/coerce+2CXStringViews+2CAAStringSet-method.html /usr/lib64/R/library/Biostrings/help/coerce+2CXStringViews+2CBStringSet-method.html /usr/lib64/R/library/Biostrings/help/coerce+2CXStringViews+2CDNAStringSet-method.html /usr/lib64/R/library/Biostrings/help/coerce+2CXStringViews+2CRNAStringSet-method.html /usr/lib64/R/library/Biostrings/help/coerce+2CXStringViews+2CXStringSet-method.html /usr/lib64/R/library/Biostrings/help/coerce+2Ccharacter+2CAAMultipleAlignment-method.html /usr/lib64/R/library/Biostrings/help/coerce+2Ccharacter+2CAAString-method.html /usr/lib64/R/library/Biostrings/help/coerce+2Ccharacter+2CBString-method.html /usr/lib64/R/library/Biostrings/help/coerce+2Ccharacter+2CDNAMultipleAlignment-method.html /usr/lib64/R/library/Biostrings/help/coerce+2Ccharacter+2CDNAString-method.html /usr/lib64/R/library/Biostrings/help/coerce+2Ccharacter+2CIlluminaQuality-method.html /usr/lib64/R/library/Biostrings/help/coerce+2Ccharacter+2CPhredQuality-method.html /usr/lib64/R/library/Biostrings/help/coerce+2Ccharacter+2CRNAMultipleAlignment-method.html /usr/lib64/R/library/Biostrings/help/coerce+2Ccharacter+2CRNAString-method.html /usr/lib64/R/library/Biostrings/help/coerce+2Ccharacter+2CSolexaQuality-method.html /usr/lib64/R/library/Biostrings/help/coerce+2Ccharacter+2CXString-method.html /usr/lib64/R/library/Biostrings/help/coerce+2Cinteger+2CIlluminaQuality-method.html /usr/lib64/R/library/Biostrings/help/coerce+2Cinteger+2CPhredQuality-method.html /usr/lib64/R/library/Biostrings/help/coerce+2Cinteger+2CSolexaQuality-method.html /usr/lib64/R/library/Biostrings/help/coerce+2Clist+2CAAStringSetList-method.html /usr/lib64/R/library/Biostrings/help/coerce+2Clist+2CBStringSetList-method.html /usr/lib64/R/library/Biostrings/help/coerce+2Clist+2CDNAStringSetList-method.html /usr/lib64/R/library/Biostrings/help/coerce+2Clist+2CRNAStringSetList-method.html /usr/lib64/R/library/Biostrings/help/coerce+2Clist+2CXStringSetList-method.html /usr/lib64/R/library/Biostrings/help/coerce+2Cnumeric+2CIlluminaQuality-method.html /usr/lib64/R/library/Biostrings/help/coerce+2Cnumeric+2CPhredQuality-method.html /usr/lib64/R/library/Biostrings/help/coerce+2Cnumeric+2CSolexaQuality-method.html /usr/lib64/R/library/Biostrings/help/collapse+2CMaskedXString-method.html /usr/lib64/R/library/Biostrings/help/colmask+2CMultipleAlignment-method.html /usr/lib64/R/library/Biostrings/help/colmask+3C-+2CMultipleAlignment+2CANY-method.html /usr/lib64/R/library/Biostrings/help/colmask+3C-+2CMultipleAlignment+2CNULL-method.html /usr/lib64/R/library/Biostrings/help/colmask+3C-.html /usr/lib64/R/library/Biostrings/help/colmask.html /usr/lib64/R/library/Biostrings/help/compareStrings+2CAlignedXStringSet0+2CAlignedXStringSet0-method.html /usr/lib64/R/library/Biostrings/help/compareStrings+2CPairwiseAlignments+2Cmissing-method.html /usr/lib64/R/library/Biostrings/help/compareStrings+2CXString+2CXString-method.html /usr/lib64/R/library/Biostrings/help/compareStrings+2CXStringSet+2CXStringSet-method.html /usr/lib64/R/library/Biostrings/help/compareStrings+2Ccharacter+2Ccharacter-method.html /usr/lib64/R/library/Biostrings/help/compareStrings.html /usr/lib64/R/library/Biostrings/help/complement+2CDNAString-method.html /usr/lib64/R/library/Biostrings/help/complement+2CDNAStringSet-method.html /usr/lib64/R/library/Biostrings/help/complement+2CMaskedDNAString-method.html /usr/lib64/R/library/Biostrings/help/complement+2CMaskedRNAString-method.html /usr/lib64/R/library/Biostrings/help/complement+2CRNAString-method.html /usr/lib64/R/library/Biostrings/help/complement+2CRNAStringSet-method.html /usr/lib64/R/library/Biostrings/help/complement+2CXStringViews-method.html /usr/lib64/R/library/Biostrings/help/complement.html /usr/lib64/R/library/Biostrings/help/computeAllFlinks+2CACtree2-method.html /usr/lib64/R/library/Biostrings/help/computeAllFlinks.html /usr/lib64/R/library/Biostrings/help/consensusMatrix+2CMultipleAlignment-method.html /usr/lib64/R/library/Biostrings/help/consensusMatrix+2CPairwiseAlignmentsSingleSubject-method.html /usr/lib64/R/library/Biostrings/help/consensusMatrix+2CXStringSet-method.html /usr/lib64/R/library/Biostrings/help/consensusMatrix+2CXStringViews-method.html /usr/lib64/R/library/Biostrings/help/consensusMatrix+2Ccharacter-method.html /usr/lib64/R/library/Biostrings/help/consensusMatrix+2Cmatrix-method.html /usr/lib64/R/library/Biostrings/help/consensusMatrix.html /usr/lib64/R/library/Biostrings/help/consensusString+2CAAMultipleAlignment-method.html /usr/lib64/R/library/Biostrings/help/consensusString+2CANY-method.html /usr/lib64/R/library/Biostrings/help/consensusString+2CBStringSet-method.html /usr/lib64/R/library/Biostrings/help/consensusString+2CDNAMultipleAlignment-method.html /usr/lib64/R/library/Biostrings/help/consensusString+2CDNAStringSet-method.html /usr/lib64/R/library/Biostrings/help/consensusString+2CMultipleAlignment-method.html /usr/lib64/R/library/Biostrings/help/consensusString+2CRNAMultipleAlignment-method.html /usr/lib64/R/library/Biostrings/help/consensusString+2CRNAStringSet-method.html /usr/lib64/R/library/Biostrings/help/consensusString+2CXStringViews-method.html /usr/lib64/R/library/Biostrings/help/consensusString+2Cmatrix-method.html /usr/lib64/R/library/Biostrings/help/consensusString.html /usr/lib64/R/library/Biostrings/help/consensusViews+2CAAMultipleAlignment-method.html /usr/lib64/R/library/Biostrings/help/consensusViews+2CDNAMultipleAlignment-method.html /usr/lib64/R/library/Biostrings/help/consensusViews+2CMultipleAlignment-method.html /usr/lib64/R/library/Biostrings/help/consensusViews+2CRNAMultipleAlignment-method.html /usr/lib64/R/library/Biostrings/help/consensusViews.html /usr/lib64/R/library/Biostrings/help/countPDict+2CMaskedXString-method.html /usr/lib64/R/library/Biostrings/help/countPDict+2CXString-method.html /usr/lib64/R/library/Biostrings/help/countPDict+2CXStringSet-method.html /usr/lib64/R/library/Biostrings/help/countPDict+2CXStringViews-method.html /usr/lib64/R/library/Biostrings/help/countPDict.html /usr/lib64/R/library/Biostrings/help/countPWM+2CDNAString-method.html /usr/lib64/R/library/Biostrings/help/countPWM+2CMaskedDNAString-method.html /usr/lib64/R/library/Biostrings/help/countPWM+2CXStringViews-method.html /usr/lib64/R/library/Biostrings/help/countPWM+2Ccharacter-method.html /usr/lib64/R/library/Biostrings/help/countPWM.html /usr/lib64/R/library/Biostrings/help/countPattern+2CMaskedXString-method.html /usr/lib64/R/library/Biostrings/help/countPattern+2CXString-method.html /usr/lib64/R/library/Biostrings/help/countPattern+2CXStringSet-method.html /usr/lib64/R/library/Biostrings/help/countPattern+2CXStringViews-method.html /usr/lib64/R/library/Biostrings/help/countPattern+2Ccharacter-method.html /usr/lib64/R/library/Biostrings/help/countPattern.html /usr/lib64/R/library/Biostrings/help/coverage+2CAlignedXStringSet0-method.html /usr/lib64/R/library/Biostrings/help/coverage+2CMIndex-method.html /usr/lib64/R/library/Biostrings/help/coverage+2CMaskedXString-method.html /usr/lib64/R/library/Biostrings/help/coverage+2CPairwiseAlignmentsSingleSubject-method.html /usr/lib64/R/library/Biostrings/help/coverage+2CPairwiseAlignmentsSingleSubjectSummary-method.html /usr/lib64/R/library/Biostrings/help/deletion+2CInDel-method.html /usr/lib64/R/library/Biostrings/help/deletion+2CPairwiseAlignments-method.html /usr/lib64/R/library/Biostrings/help/deletion.html /usr/lib64/R/library/Biostrings/help/detail+2CMultipleAlignment-method.html /usr/lib64/R/library/Biostrings/help/detail.html /usr/lib64/R/library/Biostrings/help/dim+2CMultipleAlignment-method.html /usr/lib64/R/library/Biostrings/help/dinucleotideFrequency.html /usr/lib64/R/library/Biostrings/help/dinucleotideFrequencyTest+2CDNAStringSet-method.html /usr/lib64/R/library/Biostrings/help/dinucleotideFrequencyTest+2CRNAStringSet-method.html /usr/lib64/R/library/Biostrings/help/dinucleotideFrequencyTest.html /usr/lib64/R/library/Biostrings/help/duplicated+2CPDict-method.html /usr/lib64/R/library/Biostrings/help/duplicated+2CPreprocessedTB-method.html /usr/lib64/R/library/Biostrings/help/elementNROWS+2CMIndex-method.html /usr/lib64/R/library/Biostrings/help/encoding+2CXStringQuality-method.html /usr/lib64/R/library/Biostrings/help/encoding.html /usr/lib64/R/library/Biostrings/help/end+2CAlignedXStringSet0-method.html /usr/lib64/R/library/Biostrings/help/endIndex+2CByPos_MIndex-method.html /usr/lib64/R/library/Biostrings/help/endIndex.html /usr/lib64/R/library/Biostrings/help/errorSubstitutionMatrices.html /usr/lib64/R/library/Biostrings/help/extractAllMatches.html /usr/lib64/R/library/Biostrings/help/extractAt+2CXString-method.html /usr/lib64/R/library/Biostrings/help/extractAt+2CXStringSet-method.html /usr/lib64/R/library/Biostrings/help/extractAt.html /usr/lib64/R/library/Biostrings/help/extract_character_from_XString_by_positions+2CXString-method.html /usr/lib64/R/library/Biostrings/help/extract_character_from_XString_by_positions.html /usr/lib64/R/library/Biostrings/help/extract_character_from_XString_by_ranges+2CXString-method.html /usr/lib64/R/library/Biostrings/help/extract_character_from_XString_by_ranges.html /usr/lib64/R/library/Biostrings/help/fasta.index.html /usr/lib64/R/library/Biostrings/help/fasta.seqlengths.html /usr/lib64/R/library/Biostrings/help/fastq.geometry.html /usr/lib64/R/library/Biostrings/help/fastq.seqlengths.html /usr/lib64/R/library/Biostrings/help/findPalindromes+2CDNAString-method.html /usr/lib64/R/library/Biostrings/help/findPalindromes+2CMaskedXString-method.html /usr/lib64/R/library/Biostrings/help/findPalindromes+2CRNAString-method.html /usr/lib64/R/library/Biostrings/help/findPalindromes+2CXString-method.html /usr/lib64/R/library/Biostrings/help/findPalindromes+2CXStringViews-method.html /usr/lib64/R/library/Biostrings/help/findPalindromes.html /usr/lib64/R/library/Biostrings/help/gaps+2CMaskedXString-method.html /usr/lib64/R/library/Biostrings/help/getGeneticCode.html /usr/lib64/R/library/Biostrings/help/getSeq.html /usr/lib64/R/library/Biostrings/help/get_seqtype_conversion_lookup.html /usr/lib64/R/library/Biostrings/help/gregexpr2.html /usr/lib64/R/library/Biostrings/help/hasAllFlinks+2CACtree2-method.html /usr/lib64/R/library/Biostrings/help/hasAllFlinks.html /usr/lib64/R/library/Biostrings/help/hasLetterAt.html /usr/lib64/R/library/Biostrings/help/hasOnlyBaseLetters+2CDNAString-method.html /usr/lib64/R/library/Biostrings/help/hasOnlyBaseLetters+2CDNAStringSet-method.html /usr/lib64/R/library/Biostrings/help/hasOnlyBaseLetters+2CMaskedXString-method.html /usr/lib64/R/library/Biostrings/help/hasOnlyBaseLetters+2CRNAString-method.html /usr/lib64/R/library/Biostrings/help/hasOnlyBaseLetters+2CRNAStringSet-method.html /usr/lib64/R/library/Biostrings/help/hasOnlyBaseLetters+2CXStringViews-method.html /usr/lib64/R/library/Biostrings/help/hasOnlyBaseLetters.html /usr/lib64/R/library/Biostrings/help/head+2CPDict3Parts-method.html /usr/lib64/R/library/Biostrings/help/head+2CTB_PDict-method.html /usr/lib64/R/library/Biostrings/help/indel+2CAlignedXStringSet0-method.html /usr/lib64/R/library/Biostrings/help/indel+2CPairwiseAlignments-method.html /usr/lib64/R/library/Biostrings/help/indel.html /usr/lib64/R/library/Biostrings/help/initialize+2CACtree2-method.html /usr/lib64/R/library/Biostrings/help/initialize+2CPreprocessedTB-method.html /usr/lib64/R/library/Biostrings/help/initialize+2CTwobit-method.html /usr/lib64/R/library/Biostrings/help/initialize+2CXStringCodec-method.html /usr/lib64/R/library/Biostrings/help/injectHardMask+2CMaskedXString-method.html /usr/lib64/R/library/Biostrings/help/injectHardMask+2CXStringViews-method.html /usr/lib64/R/library/Biostrings/help/injectHardMask.html /usr/lib64/R/library/Biostrings/help/insertion+2CInDel-method.html /usr/lib64/R/library/Biostrings/help/insertion+2CPairwiseAlignments-method.html /usr/lib64/R/library/Biostrings/help/insertion.html /usr/lib64/R/library/Biostrings/help/is.na+2CXStringSet-method.html /usr/lib64/R/library/Biostrings/help/isMatchingAt.html /usr/lib64/R/library/Biostrings/help/isMatchingEndingAt+2CXString-method.html /usr/lib64/R/library/Biostrings/help/isMatchingEndingAt+2CXStringSet-method.html /usr/lib64/R/library/Biostrings/help/isMatchingEndingAt+2Ccharacter-method.html /usr/lib64/R/library/Biostrings/help/isMatchingEndingAt.html /usr/lib64/R/library/Biostrings/help/isMatchingStartingAt+2CXString-method.html /usr/lib64/R/library/Biostrings/help/isMatchingStartingAt+2CXStringSet-method.html /usr/lib64/R/library/Biostrings/help/isMatchingStartingAt+2Ccharacter-method.html /usr/lib64/R/library/Biostrings/help/isMatchingStartingAt.html /usr/lib64/R/library/Biostrings/help/lcprefix+2CXString+2CXString-method.html /usr/lib64/R/library/Biostrings/help/lcprefix+2CXString+2Ccharacter-method.html /usr/lib64/R/library/Biostrings/help/lcprefix+2Ccharacter+2CXString-method.html /usr/lib64/R/library/Biostrings/help/lcprefix+2Ccharacter+2Ccharacter-method.html /usr/lib64/R/library/Biostrings/help/lcprefix.html /usr/lib64/R/library/Biostrings/help/lcsubstr+2CXString+2CXString-method.html /usr/lib64/R/library/Biostrings/help/lcsubstr+2CXString+2Ccharacter-method.html /usr/lib64/R/library/Biostrings/help/lcsubstr+2Ccharacter+2CXString-method.html /usr/lib64/R/library/Biostrings/help/lcsubstr+2Ccharacter+2Ccharacter-method.html /usr/lib64/R/library/Biostrings/help/lcsubstr.html /usr/lib64/R/library/Biostrings/help/lcsuffix+2CXString+2CXString-method.html /usr/lib64/R/library/Biostrings/help/lcsuffix+2CXString+2Ccharacter-method.html /usr/lib64/R/library/Biostrings/help/lcsuffix+2Ccharacter+2CXString-method.html /usr/lib64/R/library/Biostrings/help/lcsuffix+2Ccharacter+2Ccharacter-method.html /usr/lib64/R/library/Biostrings/help/lcsuffix.html /usr/lib64/R/library/Biostrings/help/length+2CMIndex-method.html /usr/lib64/R/library/Biostrings/help/length+2CMaskedXString-method.html /usr/lib64/R/library/Biostrings/help/length+2CPDict-method.html /usr/lib64/R/library/Biostrings/help/length+2CPDict3Parts-method.html /usr/lib64/R/library/Biostrings/help/length+2CPairwiseAlignmentsSingleSubjectSummary-method.html /usr/lib64/R/library/Biostrings/help/length+2CPreprocessedTB-method.html /usr/lib64/R/library/Biostrings/help/length+2CSparseList-method.html /usr/lib64/R/library/Biostrings/help/letter+2CMaskedXString-method.html /usr/lib64/R/library/Biostrings/help/letter+2CXString-method.html /usr/lib64/R/library/Biostrings/help/letter+2CXStringViews-method.html /usr/lib64/R/library/Biostrings/help/letter+2Ccharacter-method.html /usr/lib64/R/library/Biostrings/help/letter.html /usr/lib64/R/library/Biostrings/help/letterFrequency+2CMaskedXString-method.html /usr/lib64/R/library/Biostrings/help/letterFrequency+2CXString-method.html /usr/lib64/R/library/Biostrings/help/letterFrequency+2CXStringSet-method.html /usr/lib64/R/library/Biostrings/help/letterFrequency+2CXStringViews-method.html /usr/lib64/R/library/Biostrings/help/letterFrequency.html /usr/lib64/R/library/Biostrings/help/letterFrequencyInSlidingView+2CXString-method.html /usr/lib64/R/library/Biostrings/help/letterFrequencyInSlidingView.html /usr/lib64/R/library/Biostrings/help/longestConsecutive.html /usr/lib64/R/library/Biostrings/help/lowlevel-matching.html /usr/lib64/R/library/Biostrings/help/make_XStringSet_from_strings+2CXStringSet-method.html /usr/lib64/R/library/Biostrings/help/make_XStringSet_from_strings.html /usr/lib64/R/library/Biostrings/help/make_XString_from_string+2CXString-method.html /usr/lib64/R/library/Biostrings/help/make_XString_from_string.html /usr/lib64/R/library/Biostrings/help/mask.html /usr/lib64/R/library/Biostrings/help/maskGaps+2CMultipleAlignment-method.html /usr/lib64/R/library/Biostrings/help/maskGaps.html /usr/lib64/R/library/Biostrings/help/maskMotif+2CMaskedXString+2CXString-method.html /usr/lib64/R/library/Biostrings/help/maskMotif+2CMaskedXString+2Ccharacter-method.html /usr/lib64/R/library/Biostrings/help/maskMotif+2CMultipleAlignment+2CANY-method.html /usr/lib64/R/library/Biostrings/help/maskMotif+2CXString+2CANY-method.html /usr/lib64/R/library/Biostrings/help/maskMotif.html /usr/lib64/R/library/Biostrings/help/maskeddim+2CMultipleAlignment-method.html /usr/lib64/R/library/Biostrings/help/maskeddim.html /usr/lib64/R/library/Biostrings/help/maskedncol+2CMultipleAlignment-method.html /usr/lib64/R/library/Biostrings/help/maskedncol.html /usr/lib64/R/library/Biostrings/help/maskednrow+2CMultipleAlignment-method.html /usr/lib64/R/library/Biostrings/help/maskednrow.html /usr/lib64/R/library/Biostrings/help/maskedratio+2CMaskedXString-method.html /usr/lib64/R/library/Biostrings/help/maskedratio+2CMultipleAlignment-method.html /usr/lib64/R/library/Biostrings/help/maskedwidth+2CMaskedXString-method.html /usr/lib64/R/library/Biostrings/help/masks+2CMaskedXString-method.html /usr/lib64/R/library/Biostrings/help/masks+2CXString-method.html /usr/lib64/R/library/Biostrings/help/masks+3C-+2CMaskedXString+2CMaskCollection-method.html /usr/lib64/R/library/Biostrings/help/masks+3C-+2CMaskedXString+2CNULL-method.html /usr/lib64/R/library/Biostrings/help/masks+3C-+2CXString+2CANY-method.html /usr/lib64/R/library/Biostrings/help/masks+3C-+2CXString+2CNULL-method.html /usr/lib64/R/library/Biostrings/help/masks+3C-.html /usr/lib64/R/library/Biostrings/help/masks.html /usr/lib64/R/library/Biostrings/help/match+2CANY+2CXStringSet-method.html /usr/lib64/R/library/Biostrings/help/match+2CXStringSet+2CANY-method.html /usr/lib64/R/library/Biostrings/help/match+2CXStringSet+2CXStringSet-method.html /usr/lib64/R/library/Biostrings/help/match-utils.html /usr/lib64/R/library/Biostrings/help/matchLRPatterns+2CMaskedXString-method.html /usr/lib64/R/library/Biostrings/help/matchLRPatterns+2CXString-method.html /usr/lib64/R/library/Biostrings/help/matchLRPatterns+2CXStringViews-method.html /usr/lib64/R/library/Biostrings/help/matchLRPatterns.html /usr/lib64/R/library/Biostrings/help/matchPDict+2CMaskedXString-method.html /usr/lib64/R/library/Biostrings/help/matchPDict+2CXString-method.html /usr/lib64/R/library/Biostrings/help/matchPDict+2CXStringSet-method.html /usr/lib64/R/library/Biostrings/help/matchPDict+2CXStringViews-method.html /usr/lib64/R/library/Biostrings/help/matchPDict-exact.html /usr/lib64/R/library/Biostrings/help/matchPDict-inexact.html /usr/lib64/R/library/Biostrings/help/matchPDict.html /usr/lib64/R/library/Biostrings/help/matchPWM+2CDNAString-method.html /usr/lib64/R/library/Biostrings/help/matchPWM+2CMaskedDNAString-method.html /usr/lib64/R/library/Biostrings/help/matchPWM+2CXStringViews-method.html /usr/lib64/R/library/Biostrings/help/matchPWM+2Ccharacter-method.html /usr/lib64/R/library/Biostrings/help/matchPWM.html /usr/lib64/R/library/Biostrings/help/matchPattern+2CMaskedXString-method.html /usr/lib64/R/library/Biostrings/help/matchPattern+2CXString-method.html /usr/lib64/R/library/Biostrings/help/matchPattern+2CXStringSet-method.html /usr/lib64/R/library/Biostrings/help/matchPattern+2CXStringViews-method.html /usr/lib64/R/library/Biostrings/help/matchPattern+2Ccharacter-method.html /usr/lib64/R/library/Biostrings/help/matchPattern.html /usr/lib64/R/library/Biostrings/help/matchProbePair+2CDNAString-method.html /usr/lib64/R/library/Biostrings/help/matchProbePair+2CMaskedDNAString-method.html /usr/lib64/R/library/Biostrings/help/matchProbePair+2CXStringViews-method.html /usr/lib64/R/library/Biostrings/help/matchProbePair.html /usr/lib64/R/library/Biostrings/help/matchprobes.html /usr/lib64/R/library/Biostrings/help/maxScore+2CANY-method.html /usr/lib64/R/library/Biostrings/help/maxScore.html /usr/lib64/R/library/Biostrings/help/maxWeights+2Cmatrix-method.html /usr/lib64/R/library/Biostrings/help/maxWeights.html /usr/lib64/R/library/Biostrings/help/mergeIUPACLetters.html /usr/lib64/R/library/Biostrings/help/minScore+2CANY-method.html /usr/lib64/R/library/Biostrings/help/minScore.html /usr/lib64/R/library/Biostrings/help/minWeights+2Cmatrix-method.html /usr/lib64/R/library/Biostrings/help/minWeights.html /usr/lib64/R/library/Biostrings/help/misc.html /usr/lib64/R/library/Biostrings/help/mismatch+2CANY+2CXStringViews-method.html /usr/lib64/R/library/Biostrings/help/mismatch+2CAlignedXStringSet0+2Cmissing-method.html /usr/lib64/R/library/Biostrings/help/mismatch.html /usr/lib64/R/library/Biostrings/help/mismatchSummary+2CAlignedXStringSet0-method.html /usr/lib64/R/library/Biostrings/help/mismatchSummary+2CPairwiseAlignmentsSingleSubject-method.html /usr/lib64/R/library/Biostrings/help/mismatchSummary+2CPairwiseAlignmentsSingleSubjectSummary-method.html /usr/lib64/R/library/Biostrings/help/mismatchSummary+2CQualityAlignedXStringSet-method.html /usr/lib64/R/library/Biostrings/help/mismatchSummary.html /usr/lib64/R/library/Biostrings/help/mismatchTable+2CAlignedXStringSet0-method.html /usr/lib64/R/library/Biostrings/help/mismatchTable+2CPairwiseAlignments-method.html /usr/lib64/R/library/Biostrings/help/mismatchTable+2CQualityAlignedXStringSet-method.html /usr/lib64/R/library/Biostrings/help/mismatchTable.html /usr/lib64/R/library/Biostrings/help/mkAllStrings.html /usr/lib64/R/library/Biostrings/help/names+2CMIndex-method.html /usr/lib64/R/library/Biostrings/help/names+2CPDict-method.html /usr/lib64/R/library/Biostrings/help/names+3C-+2CMIndex-method.html /usr/lib64/R/library/Biostrings/help/names+3C-+2CPDict-method.html /usr/lib64/R/library/Biostrings/help/narrow+2CQualityScaledXStringSet-method.html /usr/lib64/R/library/Biostrings/help/narrow+2Ccharacter-method.html /usr/lib64/R/library/Biostrings/help/nchar+2CAlignedXStringSet0-method.html /usr/lib64/R/library/Biostrings/help/nchar+2CMaskedXString-method.html /usr/lib64/R/library/Biostrings/help/nchar+2CMultipleAlignment-method.html /usr/lib64/R/library/Biostrings/help/nchar+2CPairwiseAlignments-method.html /usr/lib64/R/library/Biostrings/help/nchar+2CPairwiseAlignmentsSingleSubjectSummary-method.html /usr/lib64/R/library/Biostrings/help/nchar+2CXString-method.html /usr/lib64/R/library/Biostrings/help/nchar+2CXStringSet-method.html /usr/lib64/R/library/Biostrings/help/nchar+2CXStringSetList-method.html /usr/lib64/R/library/Biostrings/help/nchar+2CXStringViews-method.html /usr/lib64/R/library/Biostrings/help/ncol+2CMultipleAlignment-method.html /usr/lib64/R/library/Biostrings/help/nedit+2CPairwiseAlignments-method.html /usr/lib64/R/library/Biostrings/help/nedit+2CPairwiseAlignmentsSingleSubjectSummary-method.html /usr/lib64/R/library/Biostrings/help/nedit.html /usr/lib64/R/library/Biostrings/help/neditAt.html /usr/lib64/R/library/Biostrings/help/neditEndingAt+2CXString-method.html /usr/lib64/R/library/Biostrings/help/neditEndingAt+2CXStringSet-method.html /usr/lib64/R/library/Biostrings/help/neditEndingAt+2Ccharacter-method.html /usr/lib64/R/library/Biostrings/help/neditEndingAt.html /usr/lib64/R/library/Biostrings/help/neditStartingAt+2CXString-method.html /usr/lib64/R/library/Biostrings/help/neditStartingAt+2CXStringSet-method.html /usr/lib64/R/library/Biostrings/help/neditStartingAt+2Ccharacter-method.html /usr/lib64/R/library/Biostrings/help/neditStartingAt.html /usr/lib64/R/library/Biostrings/help/needwunsQS+2CXString+2CXString-method.html /usr/lib64/R/library/Biostrings/help/needwunsQS+2CXString+2Ccharacter-method.html /usr/lib64/R/library/Biostrings/help/needwunsQS+2Ccharacter+2CXString-method.html /usr/lib64/R/library/Biostrings/help/needwunsQS+2Ccharacter+2Ccharacter-method.html /usr/lib64/R/library/Biostrings/help/needwunsQS.html /usr/lib64/R/library/Biostrings/help/nindel+2CAlignedXStringSet0-method.html /usr/lib64/R/library/Biostrings/help/nindel+2CPairwiseAlignments-method.html /usr/lib64/R/library/Biostrings/help/nindel+2CPairwiseAlignmentsSingleSubjectSummary-method.html /usr/lib64/R/library/Biostrings/help/nindel.html /usr/lib64/R/library/Biostrings/help/nmatch+2CANY+2CXStringViews-method.html /usr/lib64/R/library/Biostrings/help/nmatch+2CPairwiseAlignments+2Cmissing-method.html /usr/lib64/R/library/Biostrings/help/nmatch+2CPairwiseAlignmentsSingleSubjectSummary+2Cmissing-method.html /usr/lib64/R/library/Biostrings/help/nmatch.html /usr/lib64/R/library/Biostrings/help/nmismatch+2CANY+2CXStringViews-method.html /usr/lib64/R/library/Biostrings/help/nmismatch+2CAlignedXStringSet0+2Cmissing-method.html /usr/lib64/R/library/Biostrings/help/nmismatch+2CPairwiseAlignments+2Cmissing-method.html /usr/lib64/R/library/Biostrings/help/nmismatch+2CPairwiseAlignmentsSingleSubjectSummary+2Cmissing-method.html /usr/lib64/R/library/Biostrings/help/nmismatch.html /usr/lib64/R/library/Biostrings/help/nnodes+2CACtree2-method.html /usr/lib64/R/library/Biostrings/help/nnodes.html /usr/lib64/R/library/Biostrings/help/nrow+2CMultipleAlignment-method.html /usr/lib64/R/library/Biostrings/help/nucleotideFrequency.html /usr/lib64/R/library/Biostrings/help/nucleotideFrequencyAt+2CXStringSet-method.html /usr/lib64/R/library/Biostrings/help/nucleotideFrequencyAt+2CXStringViews-method.html /usr/lib64/R/library/Biostrings/help/nucleotideFrequencyAt.html /usr/lib64/R/library/Biostrings/help/nucleotideSubstitutionMatrix.html /usr/lib64/R/library/Biostrings/help/oligonucleotideFrequency+2CMaskedXString-method.html /usr/lib64/R/library/Biostrings/help/oligonucleotideFrequency+2CXString-method.html /usr/lib64/R/library/Biostrings/help/oligonucleotideFrequency+2CXStringSet-method.html /usr/lib64/R/library/Biostrings/help/oligonucleotideFrequency+2CXStringViews-method.html /usr/lib64/R/library/Biostrings/help/oligonucleotideFrequency.html /usr/lib64/R/library/Biostrings/help/oligonucleotideTransitions.html /usr/lib64/R/library/Biostrings/help/padAndClip.html /usr/lib64/R/library/Biostrings/help/pairwiseAlignment+2CANY+2CANY-method.html /usr/lib64/R/library/Biostrings/help/pairwiseAlignment+2CANY+2CQualityScaledXStringSet-method.html /usr/lib64/R/library/Biostrings/help/pairwiseAlignment+2CQualityScaledXStringSet+2CANY-method.html /usr/lib64/R/library/Biostrings/help/pairwiseAlignment+2CQualityScaledXStringSet+2CQualityScaledXStringSet-method.html /usr/lib64/R/library/Biostrings/help/pairwiseAlignment.html /usr/lib64/R/library/Biostrings/help/palindromeArmLength+2CDNAString-method.html /usr/lib64/R/library/Biostrings/help/palindromeArmLength+2CRNAString-method.html /usr/lib64/R/library/Biostrings/help/palindromeArmLength+2CXString-method.html /usr/lib64/R/library/Biostrings/help/palindromeArmLength+2CXStringSet-method.html /usr/lib64/R/library/Biostrings/help/palindromeArmLength+2CXStringViews-method.html /usr/lib64/R/library/Biostrings/help/palindromeArmLength.html /usr/lib64/R/library/Biostrings/help/palindromeLeftArm+2CXString-method.html /usr/lib64/R/library/Biostrings/help/palindromeLeftArm+2CXStringViews-method.html /usr/lib64/R/library/Biostrings/help/palindromeLeftArm.html /usr/lib64/R/library/Biostrings/help/palindromeRightArm+2CXString-method.html /usr/lib64/R/library/Biostrings/help/palindromeRightArm+2CXStringViews-method.html /usr/lib64/R/library/Biostrings/help/palindromeRightArm.html /usr/lib64/R/library/Biostrings/help/parallelVectorNames+2CAlignedXStringSet0-method.html /usr/lib64/R/library/Biostrings/help/parallel_slot_names+2CAlignedXStringSet0-method.html /usr/lib64/R/library/Biostrings/help/parallel_slot_names+2CPairwiseAlignments-method.html /usr/lib64/R/library/Biostrings/help/parallel_slot_names+2CQualityScaledXStringSet-method.html /usr/lib64/R/library/Biostrings/help/paths.rds /usr/lib64/R/library/Biostrings/help/pattern+2CPairwiseAlignments-method.html /usr/lib64/R/library/Biostrings/help/pattern+2CXStringPartialMatches-method.html /usr/lib64/R/library/Biostrings/help/pattern.html /usr/lib64/R/library/Biostrings/help/patternFrequency+2CPDict-method.html /usr/lib64/R/library/Biostrings/help/patternFrequency.html /usr/lib64/R/library/Biostrings/help/pcompare+2CANY+2CXStringSet-method.html /usr/lib64/R/library/Biostrings/help/pcompare+2CXStringSet+2CANY-method.html /usr/lib64/R/library/Biostrings/help/pcompare+2CXStringSet+2CXStringSet-method.html /usr/lib64/R/library/Biostrings/help/phiX174Phage.html /usr/lib64/R/library/Biostrings/help/pid+2CPairwiseAlignments-method.html /usr/lib64/R/library/Biostrings/help/pid.html /usr/lib64/R/library/Biostrings/help/pmatchPattern+2CXString-method.html /usr/lib64/R/library/Biostrings/help/pmatchPattern+2CXStringViews-method.html /usr/lib64/R/library/Biostrings/help/pmatchPattern+2Ccharacter-method.html /usr/lib64/R/library/Biostrings/help/pmatchPattern.html /usr/lib64/R/library/Biostrings/help/print.needwunsQS.html /usr/lib64/R/library/Biostrings/help/quPhiX174.html /usr/lib64/R/library/Biostrings/help/quality+2CQualityScaledXStringSet-method.html /usr/lib64/R/library/Biostrings/help/quality.html /usr/lib64/R/library/Biostrings/help/qualitySubstitutionMatrices.html /usr/lib64/R/library/Biostrings/help/ranges+2CAlignedXStringSet0-method.html /usr/lib64/R/library/Biostrings/help/readAAMultipleAlignment.html /usr/lib64/R/library/Biostrings/help/readAAStringSet.html /usr/lib64/R/library/Biostrings/help/readBStringSet.html /usr/lib64/R/library/Biostrings/help/readDNAMultipleAlignment.html /usr/lib64/R/library/Biostrings/help/readDNAStringSet.html /usr/lib64/R/library/Biostrings/help/readQualityScaledDNAStringSet.html /usr/lib64/R/library/Biostrings/help/readRNAMultipleAlignment.html /usr/lib64/R/library/Biostrings/help/readRNAStringSet.html /usr/lib64/R/library/Biostrings/help/relistToClass+2CXStringSet-method.html /usr/lib64/R/library/Biostrings/help/replaceAmbiguities.html /usr/lib64/R/library/Biostrings/help/replaceAt+2CXString-method.html /usr/lib64/R/library/Biostrings/help/replaceAt+2CXStringSet-method.html /usr/lib64/R/library/Biostrings/help/replaceAt.html /usr/lib64/R/library/Biostrings/help/replaceLetterAt+2CDNAString-method.html /usr/lib64/R/library/Biostrings/help/replaceLetterAt+2CDNAStringSet-method.html /usr/lib64/R/library/Biostrings/help/replaceLetterAt.html /usr/lib64/R/library/Biostrings/help/reverse+2CMaskedXString-method.html /usr/lib64/R/library/Biostrings/help/reverse+2CQualityScaledXStringSet-method.html /usr/lib64/R/library/Biostrings/help/reverseComplement+2CDNAString-method.html /usr/lib64/R/library/Biostrings/help/reverseComplement+2CDNAStringSet-method.html /usr/lib64/R/library/Biostrings/help/reverseComplement+2CMaskedDNAString-method.html /usr/lib64/R/library/Biostrings/help/reverseComplement+2CMaskedRNAString-method.html /usr/lib64/R/library/Biostrings/help/reverseComplement+2CQualityScaledDNAStringSet-method.html /usr/lib64/R/library/Biostrings/help/reverseComplement+2CQualityScaledRNAStringSet-method.html /usr/lib64/R/library/Biostrings/help/reverseComplement+2CRNAString-method.html /usr/lib64/R/library/Biostrings/help/reverseComplement+2CRNAStringSet-method.html /usr/lib64/R/library/Biostrings/help/reverseComplement+2CXStringViews-method.html /usr/lib64/R/library/Biostrings/help/reverseComplement+2Cmatrix-method.html /usr/lib64/R/library/Biostrings/help/reverseComplement.html /usr/lib64/R/library/Biostrings/help/rowmask+2CMultipleAlignment-method.html /usr/lib64/R/library/Biostrings/help/rowmask+3C-+2CMultipleAlignment+2CANY-method.html /usr/lib64/R/library/Biostrings/help/rowmask+3C-+2CMultipleAlignment+2CNULL-method.html /usr/lib64/R/library/Biostrings/help/rowmask+3C-.html /usr/lib64/R/library/Biostrings/help/rowmask.html /usr/lib64/R/library/Biostrings/help/rownames+2CMultipleAlignment-method.html /usr/lib64/R/library/Biostrings/help/rownames+3C-+2CMultipleAlignment-method.html /usr/lib64/R/library/Biostrings/help/saveXStringSet.html /usr/lib64/R/library/Biostrings/help/score+2CPairwiseAlignments-method.html /usr/lib64/R/library/Biostrings/help/score+2CPairwiseAlignmentsSingleSubjectSummary-method.html /usr/lib64/R/library/Biostrings/help/seqinfo+2CDNAStringSet-method.html /usr/lib64/R/library/Biostrings/help/seqinfo+3C-+2CDNAStringSet-method.html /usr/lib64/R/library/Biostrings/help/seqinfo.html /usr/lib64/R/library/Biostrings/help/seqtype+2CAAString-method.html /usr/lib64/R/library/Biostrings/help/seqtype+2CAlignedXStringSet0-method.html /usr/lib64/R/library/Biostrings/help/seqtype+2CBString-method.html /usr/lib64/R/library/Biostrings/help/seqtype+2CDNAString-method.html /usr/lib64/R/library/Biostrings/help/seqtype+2CMaskedXString-method.html /usr/lib64/R/library/Biostrings/help/seqtype+2CMultipleAlignment-method.html /usr/lib64/R/library/Biostrings/help/seqtype+2CPairwiseAlignments-method.html /usr/lib64/R/library/Biostrings/help/seqtype+2CRNAString-method.html /usr/lib64/R/library/Biostrings/help/seqtype+2CXStringSet-method.html /usr/lib64/R/library/Biostrings/help/seqtype+2CXStringSetList-method.html /usr/lib64/R/library/Biostrings/help/seqtype+2CXStringViews-method.html /usr/lib64/R/library/Biostrings/help/seqtype+3C-+2CMaskedXString-method.html /usr/lib64/R/library/Biostrings/help/seqtype+3C-+2CXString-method.html /usr/lib64/R/library/Biostrings/help/seqtype+3C-+2CXStringSet-method.html /usr/lib64/R/library/Biostrings/help/seqtype+3C-+2CXStringSetList-method.html /usr/lib64/R/library/Biostrings/help/seqtype+3C-+2CXStringViews-method.html /usr/lib64/R/library/Biostrings/help/seqtype+3C-.html /usr/lib64/R/library/Biostrings/help/seqtype.html /usr/lib64/R/library/Biostrings/help/show+2CACtree2-method.html /usr/lib64/R/library/Biostrings/help/show+2CAlignedXStringSet0-method.html /usr/lib64/R/library/Biostrings/help/show+2CMIndex-method.html /usr/lib64/R/library/Biostrings/help/show+2CMTB_PDict-method.html /usr/lib64/R/library/Biostrings/help/show+2CMaskedXString-method.html /usr/lib64/R/library/Biostrings/help/show+2CMultipleAlignment-method.html /usr/lib64/R/library/Biostrings/help/show+2CPairwiseAlignments-method.html /usr/lib64/R/library/Biostrings/help/show+2CPairwiseAlignmentsSingleSubjectSummary-method.html /usr/lib64/R/library/Biostrings/help/show+2CQualityScaledXStringSet-method.html /usr/lib64/R/library/Biostrings/help/show+2CTB_PDict-method.html /usr/lib64/R/library/Biostrings/help/show+2CTwobit-method.html /usr/lib64/R/library/Biostrings/help/show+2CXString-method.html /usr/lib64/R/library/Biostrings/help/show+2CXStringPartialMatches-method.html /usr/lib64/R/library/Biostrings/help/show+2CXStringSet-method.html /usr/lib64/R/library/Biostrings/help/show+2CXStringSetList-method.html /usr/lib64/R/library/Biostrings/help/show+2CXStringViews-method.html /usr/lib64/R/library/Biostrings/help/showAsCell+2CXString-method.html /usr/lib64/R/library/Biostrings/help/showAsCell+2CXStringSet-method.html /usr/lib64/R/library/Biostrings/help/showAsCell+2CXStringSetList-method.html /usr/lib64/R/library/Biostrings/help/srPhiX174.html /usr/lib64/R/library/Biostrings/help/stackStrings.html /usr/lib64/R/library/Biostrings/help/start+2CAlignedXStringSet0-method.html /usr/lib64/R/library/Biostrings/help/startIndex+2CByPos_MIndex-method.html /usr/lib64/R/library/Biostrings/help/startIndex.html /usr/lib64/R/library/Biostrings/help/stringDist+2CQualityScaledXStringSet-method.html /usr/lib64/R/library/Biostrings/help/stringDist+2CXStringSet-method.html /usr/lib64/R/library/Biostrings/help/stringDist+2Ccharacter-method.html /usr/lib64/R/library/Biostrings/help/stringDist.html /usr/lib64/R/library/Biostrings/help/subject+2CPairwiseAlignments-method.html /usr/lib64/R/library/Biostrings/help/subpatterns+2CXStringPartialMatches-method.html /usr/lib64/R/library/Biostrings/help/subpatterns.html /usr/lib64/R/library/Biostrings/help/subseq+2CMaskedXString-method.html /usr/lib64/R/library/Biostrings/help/subseq+2Ccharacter-method.html /usr/lib64/R/library/Biostrings/help/subseq+3C-+2CXStringSet-method.html /usr/lib64/R/library/Biostrings/help/subseq+3C-+2Ccharacter-method.html /usr/lib64/R/library/Biostrings/help/substitution.matrices.html /usr/lib64/R/library/Biostrings/help/substitution_matrices.html /usr/lib64/R/library/Biostrings/help/substr+2CXString-method.html /usr/lib64/R/library/Biostrings/help/substring+2CXString-method.html /usr/lib64/R/library/Biostrings/help/summary+2CPairwiseAlignmentsSingleSubject-method.html /usr/lib64/R/library/Biostrings/help/tail+2CPDict3Parts-method.html /usr/lib64/R/library/Biostrings/help/tail+2CTB_PDict-method.html /usr/lib64/R/library/Biostrings/help/tb+2CPDict3Parts-method.html /usr/lib64/R/library/Biostrings/help/tb+2CPreprocessedTB-method.html /usr/lib64/R/library/Biostrings/help/tb+2CTB_PDict-method.html /usr/lib64/R/library/Biostrings/help/tb.html /usr/lib64/R/library/Biostrings/help/tb.width+2CPDict3Parts-method.html /usr/lib64/R/library/Biostrings/help/tb.width+2CPreprocessedTB-method.html /usr/lib64/R/library/Biostrings/help/tb.width+2CTB_PDict-method.html /usr/lib64/R/library/Biostrings/help/tb.width.html /usr/lib64/R/library/Biostrings/help/threebands+2Ccharacter-method.html /usr/lib64/R/library/Biostrings/help/toComplex+2CDNAString-method.html /usr/lib64/R/library/Biostrings/help/toComplex.html /usr/lib64/R/library/Biostrings/help/toString+2CAlignedXStringSet0-method.html /usr/lib64/R/library/Biostrings/help/toString+2CMaskedXString-method.html /usr/lib64/R/library/Biostrings/help/toString+2CPairwiseAlignmentsSingleSubject-method.html /usr/lib64/R/library/Biostrings/help/toString+2CXString-method.html /usr/lib64/R/library/Biostrings/help/toString+2CXStringSet-method.html /usr/lib64/R/library/Biostrings/help/toString+2CXStringViews-method.html /usr/lib64/R/library/Biostrings/help/translate+2CDNAString-method.html /usr/lib64/R/library/Biostrings/help/translate+2CDNAStringSet-method.html /usr/lib64/R/library/Biostrings/help/translate+2CMaskedDNAString-method.html /usr/lib64/R/library/Biostrings/help/translate+2CMaskedRNAString-method.html /usr/lib64/R/library/Biostrings/help/translate+2CRNAString-method.html /usr/lib64/R/library/Biostrings/help/translate+2CRNAStringSet-method.html /usr/lib64/R/library/Biostrings/help/translate.html /usr/lib64/R/library/Biostrings/help/trimLRPatterns+2CXString-method.html /usr/lib64/R/library/Biostrings/help/trimLRPatterns+2CXStringSet-method.html /usr/lib64/R/library/Biostrings/help/trimLRPatterns+2Ccharacter-method.html /usr/lib64/R/library/Biostrings/help/trimLRPatterns.html /usr/lib64/R/library/Biostrings/help/trinucleotideFrequency.html /usr/lib64/R/library/Biostrings/help/type+2CPairwiseAlignments-method.html /usr/lib64/R/library/Biostrings/help/type+2CPairwiseAlignmentsSingleSubjectSummary-method.html /usr/lib64/R/library/Biostrings/help/type.html /usr/lib64/R/library/Biostrings/help/unaligned+2CAlignedXStringSet0-method.html /usr/lib64/R/library/Biostrings/help/unaligned.html /usr/lib64/R/library/Biostrings/help/uniqueLetters+2CMaskedXString-method.html /usr/lib64/R/library/Biostrings/help/uniqueLetters+2CXString-method.html /usr/lib64/R/library/Biostrings/help/uniqueLetters+2CXStringSet-method.html /usr/lib64/R/library/Biostrings/help/uniqueLetters+2CXStringViews-method.html /usr/lib64/R/library/Biostrings/help/uniqueLetters.html /usr/lib64/R/library/Biostrings/help/unitScale.html /usr/lib64/R/library/Biostrings/help/unlist+2CMIndex-method.html /usr/lib64/R/library/Biostrings/help/unlist+2CXStringSet-method.html /usr/lib64/R/library/Biostrings/help/unmasked+2CMaskedXString-method.html /usr/lib64/R/library/Biostrings/help/unmasked+2CMultipleAlignment-method.html /usr/lib64/R/library/Biostrings/help/unmasked+2CXString-method.html /usr/lib64/R/library/Biostrings/help/unmasked.html /usr/lib64/R/library/Biostrings/help/updateObject+2CXString-method.html /usr/lib64/R/library/Biostrings/help/updateObject+2CXStringSet-method.html /usr/lib64/R/library/Biostrings/help/vcountPDict+2CMaskedXString-method.html /usr/lib64/R/library/Biostrings/help/vcountPDict+2CXString-method.html /usr/lib64/R/library/Biostrings/help/vcountPDict+2CXStringSet-method.html /usr/lib64/R/library/Biostrings/help/vcountPDict+2CXStringViews-method.html /usr/lib64/R/library/Biostrings/help/vcountPDict.html /usr/lib64/R/library/Biostrings/help/vcountPattern+2CMaskedXString-method.html /usr/lib64/R/library/Biostrings/help/vcountPattern+2CXString-method.html /usr/lib64/R/library/Biostrings/help/vcountPattern+2CXStringSet-method.html /usr/lib64/R/library/Biostrings/help/vcountPattern+2CXStringViews-method.html /usr/lib64/R/library/Biostrings/help/vcountPattern+2Ccharacter-method.html /usr/lib64/R/library/Biostrings/help/vcountPattern.html /usr/lib64/R/library/Biostrings/help/vmatchPDict+2CANY-method.html /usr/lib64/R/library/Biostrings/help/vmatchPDict+2CMaskedXString-method.html /usr/lib64/R/library/Biostrings/help/vmatchPDict+2CXString-method.html /usr/lib64/R/library/Biostrings/help/vmatchPDict.html /usr/lib64/R/library/Biostrings/help/vmatchPattern+2CMaskedXString-method.html /usr/lib64/R/library/Biostrings/help/vmatchPattern+2CXString-method.html /usr/lib64/R/library/Biostrings/help/vmatchPattern+2CXStringSet-method.html /usr/lib64/R/library/Biostrings/help/vmatchPattern+2CXStringViews-method.html /usr/lib64/R/library/Biostrings/help/vmatchPattern+2Ccharacter-method.html /usr/lib64/R/library/Biostrings/help/vmatchPattern.html /usr/lib64/R/library/Biostrings/help/vwhichPDict+2CMaskedXString-method.html /usr/lib64/R/library/Biostrings/help/vwhichPDict+2CXString-method.html /usr/lib64/R/library/Biostrings/help/vwhichPDict+2CXStringSet-method.html /usr/lib64/R/library/Biostrings/help/vwhichPDict+2CXStringViews-method.html /usr/lib64/R/library/Biostrings/help/vwhichPDict.html /usr/lib64/R/library/Biostrings/help/which.isMatchingAt.html /usr/lib64/R/library/Biostrings/help/which.isMatchingEndingAt+2CXString-method.html /usr/lib64/R/library/Biostrings/help/which.isMatchingEndingAt+2CXStringSet-method.html /usr/lib64/R/library/Biostrings/help/which.isMatchingEndingAt+2Ccharacter-method.html /usr/lib64/R/library/Biostrings/help/which.isMatchingEndingAt.html /usr/lib64/R/library/Biostrings/help/which.isMatchingStartingAt+2CXString-method.html /usr/lib64/R/library/Biostrings/help/which.isMatchingStartingAt+2CXStringSet-method.html /usr/lib64/R/library/Biostrings/help/which.isMatchingStartingAt+2Ccharacter-method.html /usr/lib64/R/library/Biostrings/help/which.isMatchingStartingAt.html /usr/lib64/R/library/Biostrings/help/whichPDict+2CMaskedXString-method.html /usr/lib64/R/library/Biostrings/help/whichPDict+2CXString-method.html /usr/lib64/R/library/Biostrings/help/whichPDict+2CXStringSet-method.html /usr/lib64/R/library/Biostrings/help/whichPDict+2CXStringViews-method.html /usr/lib64/R/library/Biostrings/help/whichPDict.html /usr/lib64/R/library/Biostrings/help/width+2CAlignedXStringSet0-method.html /usr/lib64/R/library/Biostrings/help/width+2CPDict-method.html /usr/lib64/R/library/Biostrings/help/width+2CPDict3Parts-method.html /usr/lib64/R/library/Biostrings/help/width+2CPreprocessedTB-method.html /usr/lib64/R/library/Biostrings/help/width+2Ccharacter-method.html /usr/lib64/R/library/Biostrings/help/width0+2CMIndex-method.html /usr/lib64/R/library/Biostrings/help/width0.html /usr/lib64/R/library/Biostrings/help/windows+2CQualityScaledXStringSet-method.html /usr/lib64/R/library/Biostrings/help/windows+2Ccharacter-method.html /usr/lib64/R/library/Biostrings/help/write.phylip.html /usr/lib64/R/library/Biostrings/help/writePairwiseAlignments.html /usr/lib64/R/library/Biostrings/help/writeQualityScaledXStringSet.html /usr/lib64/R/library/Biostrings/help/writeXStringSet.html /usr/lib64/R/library/Biostrings/help/wtPhiX174.html /usr/lib64/R/library/Biostrings/help/xscat.html /usr/lib64/R/library/Biostrings/help/xscodes+2CANY-method.html /usr/lib64/R/library/Biostrings/help/xscodes.html /usr/lib64/R/library/Biostrings/help/yeastSEQCHR1.html /usr/lib64/R/library/Biostrings/html /usr/lib64/R/library/Biostrings/html/00Index.html /usr/lib64/R/library/Biostrings/html/AAString-class.html /usr/lib64/R/library/Biostrings/html/AMINO_ACID_CODE.html /usr/lib64/R/library/Biostrings/html/AlignedXStringSet-class.html /usr/lib64/R/library/Biostrings/html/Biostrings-internals.html /usr/lib64/R/library/Biostrings/html/DNAString-class.html /usr/lib64/R/library/Biostrings/html/GENETIC_CODE.html /usr/lib64/R/library/Biostrings/html/HNF4alpha.html /usr/lib64/R/library/Biostrings/html/IUPAC_CODE_MAP.html /usr/lib64/R/library/Biostrings/html/InDel-class.html /usr/lib64/R/library/Biostrings/html/MIndex-class.html /usr/lib64/R/library/Biostrings/html/MaskedXString-class.html /usr/lib64/R/library/Biostrings/html/MultipleAlignment-class.html /usr/lib64/R/library/Biostrings/html/PDict-class.html /usr/lib64/R/library/Biostrings/html/PairwiseAlignments-class.html /usr/lib64/R/library/Biostrings/html/PairwiseAlignments-io.html /usr/lib64/R/library/Biostrings/html/QualityScaledXStringSet-class.html /usr/lib64/R/library/Biostrings/html/R.css /usr/lib64/R/library/Biostrings/html/RNAString-class.html /usr/lib64/R/library/Biostrings/html/XString-class.html /usr/lib64/R/library/Biostrings/html/XStringPartialMatches-class.html /usr/lib64/R/library/Biostrings/html/XStringQuality-class.html /usr/lib64/R/library/Biostrings/html/XStringSet-class.html /usr/lib64/R/library/Biostrings/html/XStringSet-comparison.html /usr/lib64/R/library/Biostrings/html/XStringSet-io.html /usr/lib64/R/library/Biostrings/html/XStringSetList-class.html /usr/lib64/R/library/Biostrings/html/XStringViews-class.html /usr/lib64/R/library/Biostrings/html/align-utils.html /usr/lib64/R/library/Biostrings/html/chartr.html /usr/lib64/R/library/Biostrings/html/detail.html /usr/lib64/R/library/Biostrings/html/dinucleotideFrequencyTest.html /usr/lib64/R/library/Biostrings/html/findPalindromes.html /usr/lib64/R/library/Biostrings/html/getSeq.html /usr/lib64/R/library/Biostrings/html/gregexpr2.html /usr/lib64/R/library/Biostrings/html/injectHardMask.html /usr/lib64/R/library/Biostrings/html/letter.html /usr/lib64/R/library/Biostrings/html/letterFrequency.html /usr/lib64/R/library/Biostrings/html/longestConsecutive.html /usr/lib64/R/library/Biostrings/html/lowlevel-matching.html /usr/lib64/R/library/Biostrings/html/maskMotif.html /usr/lib64/R/library/Biostrings/html/match-utils.html /usr/lib64/R/library/Biostrings/html/matchLRPatterns.html /usr/lib64/R/library/Biostrings/html/matchPDict-exact.html /usr/lib64/R/library/Biostrings/html/matchPDict-inexact.html /usr/lib64/R/library/Biostrings/html/matchPWM.html /usr/lib64/R/library/Biostrings/html/matchPattern.html /usr/lib64/R/library/Biostrings/html/matchProbePair.html /usr/lib64/R/library/Biostrings/html/matchprobes.html /usr/lib64/R/library/Biostrings/html/misc.html /usr/lib64/R/library/Biostrings/html/needwunsQS.html /usr/lib64/R/library/Biostrings/html/nucleotideFrequency.html /usr/lib64/R/library/Biostrings/html/padAndClip.html /usr/lib64/R/library/Biostrings/html/pairwiseAlignment.html /usr/lib64/R/library/Biostrings/html/phiX174Phage.html /usr/lib64/R/library/Biostrings/html/pid.html /usr/lib64/R/library/Biostrings/html/pmatchPattern.html /usr/lib64/R/library/Biostrings/html/replaceAt.html /usr/lib64/R/library/Biostrings/html/replaceLetterAt.html /usr/lib64/R/library/Biostrings/html/reverseComplement.html /usr/lib64/R/library/Biostrings/html/seqinfo.html /usr/lib64/R/library/Biostrings/html/stringDist.html /usr/lib64/R/library/Biostrings/html/substitution_matrices.html /usr/lib64/R/library/Biostrings/html/toComplex.html /usr/lib64/R/library/Biostrings/html/translate.html /usr/lib64/R/library/Biostrings/html/trimLRPatterns.html /usr/lib64/R/library/Biostrings/html/xscat.html /usr/lib64/R/library/Biostrings/html/yeastSEQCHR1.html /usr/lib64/R/library/Biostrings/libs /usr/lib64/R/library/Biostrings/libs/Biostrings.so /usr/lib64/R/library/Biostrings/unitTests /usr/lib64/R/library/Biostrings/unitTests/test_MultipleAlignment.R /usr/lib64/R/library/Biostrings/unitTests/test_XString.R /usr/lib64/R/library/Biostrings/unitTests/test_XStringSet-io.R /usr/lib64/R/library/Biostrings/unitTests/test_XStringSet.R /usr/lib64/R/library/Biostrings/unitTests/test_XStringSetList.R /usr/lib64/R/library/Biostrings/unitTests/test_findPalindromes.R /usr/lib64/R/library/Biostrings/unitTests/test_matchDNAPattern.R.FIXME /usr/lib64/R/library/Biostrings/unitTests/test_matchPDict.R /usr/lib64/R/library/Biostrings/unitTests/test_pairwiseAlignment.R /usr/lib64/R/library/Biostrings/unitTests/test_seqinfo.R /usr/lib64/R/library/Biostrings/unitTests/test_twoWayAlphabetFrequency.R
Generated by rpm2html 1.8.1
Fabrice Bellet, Sun Oct 27 06:41:21 2024