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python3-steps-openmpi-3.6.0-36.fc41 RPM for x86_64

From Fedora 41 for x86_64 / p

Name: python3-steps-openmpi Distribution: Fedora Project
Version: 3.6.0 Vendor: Fedora Project
Release: 36.fc41 Build date: Sat Jul 20 05:36:34 2024
Group: Unspecified Build host: buildhw-x86-11.iad2.fedoraproject.org
Size: 9180955 Source RPM: python-steps-3.6.0-36.fc41.src.rpm
Packager: Fedora Project
Url: http://steps.sourceforge.net/
Summary: steps built with openmpi
 
STEPS is a package for exact stochastic simulation of reaction-diffusion
systems in arbitrarily complex 3D geometries. Our core simulation algorithm is
an implementation of Gillespie's SSA, extended to deal with diffusion of
molecules over the elements of a 3D tetrahedral mesh.

While it was mainly developed for simulating detailed models of neuronal
signaling pathways in dendrites and around synapses, it is a general tool and
can be used for studying any biochemical pathway in which spatial gradients and
morphology are thought to play a role.

STEPS also supports accurate and efficient computational of local membrane
potentials on tetrahedral meshes, with the addition of voltage-gated channels
and currents. Tight integration between the reaction-diffusion calculations and
the tetrahedral mesh potentials allows detailed coupling between molecular
activity and local electrical excitability.

We have implemented STEPS as a set of Python modules, which means STEPS users
can use Python scripts to control all aspects of setting up the model,
generating a mesh, controlling the simulation and generating and analyzing
output. The core computational routines are still implemented as C/C++
extension modules for maximal speed of execution.

STEPS 3.0.0 and above provide early parallel solution for stochastic spatial
reaction-diffusion and electric field simulation.

Documentation can be found here:
http://steps.sourceforge.net/manual/manual_index.html

Provides

Requires

License

GPLv2

Changelog

* Fri Jul 19 2024 Fedora Release Engineering <[email protected]> - 3.6.0-36
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_41_Mass_Rebuild
* Sat Jun 08 2024 Python Maint <[email protected]> - 3.6.0-35
  - Rebuilt for Python 3.13
* Fri Jan 26 2024 Fedora Release Engineering <[email protected]> - 3.6.0-34
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild
* Mon Jan 22 2024 Fedora Release Engineering <[email protected]> - 3.6.0-33
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild
* Mon Oct 30 2023 Benjamin A. Beasley <[email protected]> - 3.6.0-32
  - Rebuild for gtest 1.14.0
* Sun Oct 29 2023 Orion Poplawski <[email protected]> - 3.6.0-31
  - Rebuild for openmpi 5.0.0, drops C++ API
* Fri Jul 21 2023 Fedora Release Engineering <[email protected]> - 3.6.0-30
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_39_Mass_Rebuild
* Tue Jun 27 2023 Python Maint <[email protected]> - 3.6.0-29
  - Rebuilt for Python 3.12
* Fri Feb 03 2023 Benjamin A. Beasley <[email protected]> - 3.6.0-28
  - Leaf package on ix86: drop ix86 support
* Tue Jan 24 2023 Benjamin A. Beasley <[email protected]> - 3.6.0-27
  - Rebuilt for gtest 1.13.0 (fix RHBZ#2164003)
  - Build with C++14 instead of C++11, since gtest dropped support
  - Add a missing #include directive for GCC 13
* Tue Jan 24 2023 Benjamin A. Beasley <[email protected]> - 3.6.0-26
  - Remove old easylogging++ sources from dist-git
* Fri Jan 20 2023 Fedora Release Engineering <[email protected]> - 3.6.0-25
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_38_Mass_Rebuild
* Thu Sep 08 2022 Benjamin A. Beasley <[email protected]> - 3.6.0-24
  - Tidy up spec file formatting
* Thu Sep 08 2022 Benjamin A. Beasley <[email protected]> - 3.6.0-23
  - Stop numbering patches
* Thu Sep 08 2022 Benjamin A. Beasley <[email protected]> - 3.6.0-22
  - Unbundle easyloggingpp
* Mon Aug 29 2022 Benjamin A. Beasley <[email protected]> - 3.6.0-21
  - Improve treatment of bundled sundials(2)
  - Unbundling currently works up to linking, where there are undefined
    references
* Mon Aug 29 2022 Benjamin A. Beasley <[email protected]> - 3.6.0-20
  - Use more standard macros where we can
* Mon Aug 29 2022 Benjamin A. Beasley <[email protected]> - 3.6.0-19
  - Add -DCMAKE_INSTALL_DO_STRIP:BOOL=OFF to match %%cmake
* Mon Aug 29 2022 Benjamin A. Beasley <[email protected]> - 3.6.0-18
  - Use pkgconf to set unbundled gtest flags
* Mon Aug 29 2022 Benjamin A. Beasley <[email protected]> - 3.6.0-17
  - Simplify patch application
* Mon Aug 29 2022 Benjamin A. Beasley <[email protected]> - 3.6.0-16
  - Better handle bundled easyloggingpp dependency
* Thu Aug 18 2022 Benjamin A. Beasley <[email protected]> - 3.6.0-15
  - Remove unbundled dependencies in %%prep
* Thu Aug 18 2022 Benjamin A. Beasley <[email protected]> - 3.6.0-14
  - Remove workaround for pre-flexiblas Fedora versions
* Thu Aug 18 2022 Benjamin A. Beasley <[email protected]> - 3.6.0-13
  - Reduce macro indirection in the spec file
* Fri Jul 22 2022 Fedora Release Engineering <[email protected]> - 3.6.0-12
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_37_Mass_Rebuild

Files

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Fabrice Bellet, Sun Oct 27 02:54:38 2024